KEGG   Salvia miltiorrhiza (redroot sage): 131009025
Entry
131009025         CDS       T09291                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03082  ATP-dependent chromatin remodeling
smil03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131009025
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    131009025
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smil01009]
    131009025
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smil03021]
    131009025
   03036 Chromosome and associated proteins [BR:smil03036]
    131009025
Protein phosphatases and associated proteins [BR:smil01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     131009025
Transcription machinery [BR:smil03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     131009025
    SWI/SNF complex
     131009025
Chromosome and associated proteins [BR:smil03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    131009025
   PBAF complex
    131009025
   SWI/SNF complex
    131009025
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 131009025
NCBI-ProteinID: XP_057792197
LinkDB
Position
2:71511881..71517933
AA seq 241 aa
MKSHSPWSTARNPVKFRIPTADNLVPIRLDIEIEGQRFRDAFIWNPSDPDSEVVVFAKRT
VKDLKLPPAFVTQIAQSIQTQLTEFRSYEGQDMYTGEKVVPIKLDLRVNSTLIKDHFLWD
LNNFESNPEEFAKTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQNVTSARESRINKKGRR
GLEHSQASKNSGNAVDLFKLFGSKSSVVRKRKEWDVYEPMIDLLSNDEVDALEAKEERNG
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaatcccactctccatggagcacagccagaaacccagtcaagttccggataccaaca
gcagataacctagtccctatacgcctggacatcgaaattgagggacagagatttagagat
gctttcatctggaacccttctgatcctgattctgaagtagtggtgtttgcaaaaagaaca
gtgaaagacttgaagcttcctcctgcttttgtcacacagattgctcaatccatacagacg
cagctaactgaatttcggtcgtatgaagggcaagatatgtatactggcgagaaagttgtt
cctatcaagcttgatcttcgtgttaacagtactcttataaaagatcattttttatgggat
ttgaacaactttgagagcaaccctgaagaatttgccaaaactttttgcaaagacatgggc
attgaagatcctgaagttggtcctgcaattgcaattgccatacgagaacaactttatgag
attgctgtacaaaatgtgacttcagcccgtgaaagcagaataaacaagaaaggacgcaga
gggcttgaacatagccaggccagcaagaacagtgggaatgctgtcgacttatttaagtta
tttggcagcaagtccagcgtcgtcaggaagaggaaggagtgggatgtatatgaaccgatg
atcgatctcttatcgaacgacgaggtcgacgcccttgaagctaaggaggaaagaaatggc
cgatga

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