Salvia miltiorrhiza (redroot sage): 131009205
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Entry
131009205 CDS
T09291
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
131009205
03009 Ribosome biogenesis [BR:
smil03009
]
131009205
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131009205
Spliceosome [BR:
smil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131009205
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
90S particles
Helicases
131009205
Pre-60S particles
131009205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
131009205
NCBI-ProteinID:
XP_057792442
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All DBs
Position
2:complement(74264302..74277639)
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AA seq
583 aa
AA seq
DB search
MAGVETGGEGVMDSTKKKRKRNRGKSKTPEPRKDDEMEAEDDEVEKEVEEEEVAVEEKMK
EKKRKKEIETAVEEERKVEEESGFKVNPPSGIMSSEAFEALPLSKLSMDAIRDMKFSFMT
QIQSRSIPPLLEGKDVLGAARTGSGKTLAFLVPAVELLFNLRFTPRNGTGVIVICPTREL
AMQTRDVAEELLKYHSQTLGLVIGGASQRREKECIVKGVNLLVATPGRLLDHLRRTKGFI
YKNLKCLVIDEADRLLEQNFEDDMKEIIKILPKERQTVLFSATQTKKVEDLARLSFQTKP
VYIDVDDGRKRVTNEGLQQGYCVVPCFQRFNLLHAFLKKNLSKKVMVFFSSCNSVKFHSE
LLRYIQIDCQDIYGKQKQQKRTSTFFNFCKAEKGILLCTDVGARGLDIPAVDWIVQYDPP
DNPKEYIHRVGRTARGEGAKGKALLFLTEQELRFLAYLKAAKVPLEPYEYDEKKMVNAQS
MLAKLISQNPYLNKSAKDAYRSYILAYNSHKMKDIFNVHNLNLEDVAASFCFSSPPRVSL
NINSNASKFRRKSRKTDGSRHGFSRSNPYGRRGGDDTRQFVRY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtggaaactggaggagaaggagttatggactccacgaagaagaagcgtaag
agaaatagaggcaaaagcaaaactccggaaccccgaaaagatgatgagatggaagccgaa
gacgacgaagtagagaaagaggttgaggaagaagaagtggcagtggaggagaagatgaaa
gagaagaaaaggaagaaggaaatcgagacagctgtagaagaagagagaaaggtggaagag
gagagtggtttcaaggtgaatccgccgtcggggattatgagcagcgaagcgtttgaagcg
ctgccgttgtcgaagctctctatggatgccatcagagatatgaaatttagctttatgact
cagatccaatctagatcaattccaccacttttagaagggaaagatgttcttggtgctgca
aggacaggttctgggaaaacacttgcctttttggttccagctgttgaattgttgtttaat
ctgcgttttacgcctcggaatgggactggtgtcattgtcatttgtccaacaagggagttg
gcaatgcagacgcgtgatgtagctgaggagcttctgaagtatcactcgcagacactggga
ttggtaattgggggtgcatcacaaagaagagaaaaagagtgtattgtcaaaggagtaaac
cttttagtagcgacccctggtcgactgcttgaccatctccgaagaacaaagggttttata
tataaaaacctcaagtgtcttgtgatcgatgaagctgataggttattggaacaaaatttc
gaagatgatatgaaggaaattattaaaattttgcctaaggagaggcaaacggttcttttc
tcggctacccaaacaaagaaggttgaggatcttgcgaggttatcctttcagacaaagcca
gtttatatcgacgtggatgatggaaggaagagggtcacaaatgaaggactgcagcaaggt
tattgtgttgtcccttgcttccagagatttaatcttctccacgccttcttgaagaagaat
ctgtccaagaaagtcatggttttcttctcctcctgcaattctgtcaagttccattcagaa
cttcttcgatacattcagatcgattgccaagatatctatggtaagcagaagcagcagaaa
agaacatctacctttttcaatttctgcaaagctgagaagggcatcttgttgtgcacggac
gttggtgcacgcggccttgacattccggcagtggactggattgtgcagtatgaccctccc
gacaaccccaaggaatacattcacagagttggccgaacagcccgtggggaaggagcgaaa
gggaaggccttgcttttcttgactgagcaagagctacggtttcttgcataccttaaggct
gcaaaagtgccactcgagccgtatgaatatgatgagaagaagatggtgaatgctcaatct
atgttggcaaagttaatctcccaaaatccttacttaaacaagtcagccaaagacgcctac
agatcctacattctggcgtacaattcacacaagatgaaggacatcttcaatgttcataac
ctcaatctagaggatgtggctgcttcgttctgcttcagctcgcccccgagagtgagctta
aacatcaacagcaatgcctccaagttcaggaggaaatcgcgtaaaactgatggaagccgg
catggattcagccggagcaacccgtacggaaggagaggtggagacgacacgcgacagttt
gttagatattaa
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