Salvia miltiorrhiza (redroot sage): 131010244
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Entry
131010244 CDS
T09291
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
smil03015
mRNA surveillance pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131010244
09122 Translation
03013 Nucleocytoplasmic transport
131010244
03015 mRNA surveillance pathway
131010244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131010244
03041 Spliceosome [BR:
smil03041
]
131010244
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
131010244
Spliceosome [BR:
smil03041
]
Common components
Common spliceosomal components
Cap binding complex
131010244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
131010244
NCBI-ProteinID:
XP_057793664
LinkDB
All DBs
Position
2:53895691..53899274
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AA seq
253 aa
AA seq
DB search
MASLFKDPTKLSAYRDRRFSGTQEEYEEALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKMVMGLDKNSKTPCGFCFVMYYSREDAEDTVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKIVQKELEAQRQLVDYGAGSLGSFAPVMQPNYGRQG
GNYGQGGSYRHGRDYPRKRHREDDRRGPDFQRRKSDFVYRRNPDNEPRPEKNPRFRESGD
SDEEEDDDRKRPS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcctcactctttaaggatccgacaaaattgtcggcctatagggacagaaggttttcc
gggacgcaggaagagtacgaggaggcgctgctgacatcgaccaccgtctacgtgggcaac
atgtcgttttacacgacggaggagcaggtgtacgagctgttctctcgggcgggggagata
aagaagatggttatgggtttggataagaacagcaagaccccttgcgggttctgcttcgta
atgtactactccagagaagatgctgaagatactgtgaaatatatcagtgggactattctc
gatgaccgtcctattcgtgtcgactttgattgggggtttcaagaaggcagacaatgggga
cgtgggcggagtggtgggcaggtgcgggatgaatatcgtacagactatgacccaggtaga
ggtggttatggaaaaatagtccagaaagagttggaagcccaaaggcagctagtcgattat
ggtgctggatcactaggttcatttgcacctgttatgcaacctaactatggtaggcaaggt
ggaaactacggtcaagggggctcctaccgtcatggcagagattacccacgtaagcgacat
agagaagatgaccgtcgtgggccagattttcaaaggagaaagtcagactttgtatatcgg
agaaatccagataatgaacccagaccggaaaaaaatccgcgatttcgagagagcggggat
tcagatgaggaggaggacgatgatcgtaagcggccatcgtag
DBGET
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