KEGG   Salvia miltiorrhiza (redroot sage): 131010306
Entry
131010306         CDS       T09291                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
smil  Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:smil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smil04131]
    131010306
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smil04147]
    131010306
Membrane trafficking [BR:smil04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    131010306
Exosome [BR:smil04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   131010306
  Exosomal proteins of bladder cancer cells
   131010306
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 TPR_COPA_B Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_Aladin NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Fis1_TPR_C
Other DBs
NCBI-GeneID: 131010306
NCBI-ProteinID: XP_057793743
LinkDB
Position
2:55097340..55103506
AA seq 1217 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGTLRKKSTVSPADDIL
RLSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAW
EVDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILSAH
PEMNLLAAGHDSGMIVFKLERERPAFSVSADSLFYVKDRFLRVFEYSTQKDTQLIPIRRP
GSNNLNQAPRILSYSPTENAVLVCSDTDGGSYELYIIPKDSYGRGDVVQDAKRGTGGSAV
FIARNRFAVLERSTNQVLVKNLRNEVVKKSALPIATDAIFYAGTGNLLCRSDDKIVIFDL
QQRIVLGDLQTSFVRYVVWSSDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDD
NGVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYMTKIYGSTIFCLDRDGKSRPIIIDSTEY
IFKLSLLRKRYDQVMSMIKNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALESGN
IEKALESAKKIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFHYLITGNLDKLS
KMMKIAEVKNEVMGQFHDALYLGDVKERVKILENAGHLPLAYITASLHGLHDIAEHLASN
LGENLPSLPEGKKASLLIPPSPVLCAGDWPLLMVSKGIFEGGLDEAGRGVVEDYEEAVDA
DWGEALDIGEVDDMKNGDIGMVVEEEDLHEENDEEGGWDLEDLDLPPETPEAATIARSSV
FVAPSPGMPVSQIWVQRSSLAAEHAAAGNFDTAMRLLHRQLGIRNFSPLRSQFIDLHMGS
HTYLPGCTSAPVVSVAVERGWSESASPNVRGPPALVFNFSQLDEKVRAGYKATTAGKFSD
ALKHFMSILHTIPLIVVETRREVDEVKELVIIVKEYVLSLKMELKRRELRDNPVRQQELA
AYFTHCNLQPPHMRLALLNAMTVCYKAQNLSTAANFARRLLETNPSNENQARTARQVLQA
AERNMTDATQLNYDFRNPFVVCGATFVPIYRGQKDVTCPYCTAHFVPSQQGQLCAVCDLA
EIECDASGLLCSPSQIR
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgttgacgaagttcgagacgaagagtaatagagttaaagggctgagcttccacagcaag
cggccatggatcttggcgagtctgcacagtggcgtcatccagctctgggattaccgcatg
ggcactctcattgatcgcttcgacgagcacgatggtcccgttcgtggcgttcatttccat
aaatctcagccactgttcgtttctggaggtgatgattacaaaatcaaggtgtggaattac
aaattgcaccggtgtctatttactctccttggtcatcttgattacatccgcacagttcag
tttcatcatgaatatccctggattgtcagtgcaagtgatgatcagacaattagaatatgg
aactggcagtctcgaacttgcatttcggtgttgacagggcacaaccattatgttatgtgt
gcctcatttcatcccaaagaagatcttgttgtttcagcctctttggatcagaccgtccgt
gtttgggatattggtaccttgaggaaaaaatccaccgtgtctcctgctgatgacattcta
cgactgtcgcaaatgaatgcagatttctttggaggggttgatgctgttgtcaagtatgtc
ctggaaggccatgatcgaggggttaactgggcttcctttcaccccactctccctttgatt
gtttctggtgcagatgatcgccaagttaaaatctggcgtatgaatgatacaaaggcttgg
gaggtagacacgttgagaggccacatgaacaatgtgtcgtgtgttctgttccatgcaagg
caggatatcattgtatcgaattccgaagacaagagtattcgagtttgggatgctactaaa
agaactggcctgcagacttttcgtagggagcatgacaggttctggatcctttcagcccat
cctgagatgaaccttctggctgctggtcatgacagtggaatgattgtctttaaattggag
agagaacgacctgccttctctgtcagtgctgattcactgttctatgtcaaggacaggttt
ttacgtgtttttgagtattcaactcaaaaagatactcaactgatccctatacgccgtcct
ggttctaataatttgaatcaagcacctcggatactttcttatagtcccactgaaaatgct
gttttggtctgttcagacacagatgggggatcatatgaactctacattatccccaaggat
agctatggaagaggtgatgtagttcaagatgcaaaaaggggtactgggggttcagctgtt
tttattgcccgaaataggtttgccgtgcttgagagaagcacgaaccaagttctggtcaag
aaccttagaaatgaagtagtgaaaaagagtgctctgcccattgctactgatgcaatcttc
tatgcgggcacaggaaatttgctgtgcaggtcagacgacaagatagtcatatttgatctg
caacaaaggattgttctcggtgatcttcagacatcttttgtgagatatgtggtttggtct
tcggatatggagagtgttgctttacttagcaaacactcaatagttattgcggataaaaag
cttgttcaccgttgcacccttcatgagactattcgtgtaaaaagtggagcttgggatgat
aatggagtcttcatctacacaactttgacccacatcaagtactgcctgccgaatggggac
agtggaatcatcaagacgcttgatgtccctgtgtacatgacaaagatatatggtagcaca
atcttttgcttggaccgagatgggaaaagccgtcctataattattgattctacagaatat
atttttaagctatccctgctgcgaaagaggtatgaccaagttatgagcatgattaagaat
tctgagttatgtggacaggccatgattgcttatctgcagcagaagggcttcccgcaagtt
gctctttattttgtgaaagatgagagaacacgctttaacttagcccttgaaagtggtaat
attgagaaggcacttgaatctgccaaaaagattgatgagaaagattactggtacaggctt
ggtgtggaggctcttcggcagggtaatgctgggatagttgaatacgcataccaaaagaca
aagaactttgagagattgtctttccattacctgataactggtaatctggacaaattgtcc
aaaatgatgaaaattgctgaagtcaagaatgaagtcatgggccagtttcatgatgcactc
tatcttggtgatgtgaaggagcgtgttaagattttggagaatgcaggtcacttgcctctt
gcatatatcacagcttcactccatgggctccatgatattgcagagcatcttgcttctaat
ctgggagagaatcttccttctcttccagaggggaagaaagcttcacttctaatacctccg
agtccagtgttatgtgctggagattggcctttgttaatggtcagtaaaggcatatttgaa
ggtggccttgatgaggcaggtaggggtgttgttgaagattatgaagaggcagtagatgct
gattggggtgaggctctggatattggtgaggtggatgacatgaagaatggagacattggc
atggtagtggaggaagaagatttgcatgaagagaatgatgaggagggcgggtgggatctc
gaagatcttgatctgcctccggaaacgccagaggcagctactattgcacgttcgtcagtg
tttgttgctccctcccctggtatgcccgtgagccagatttgggtccagagatcatctcta
gctgctgaacatgcagctgctgggaactttgacacagcaatgcgcttattgcaccggcaa
ttgggaataaggaatttctcccctctgcgatcacaatttattgatcttcacatgggcagt
catacctatttacctggttgtacctcggcaccggtggtatctgttgcagtagaaaggggt
tggagtgagtcagcaagtccaaatgtccgaggacctcctgcacttgtgttcaatttctcc
caattggatgaaaaggtcagagccggttacaaggctaccactgctggaaagttttctgat
gctcttaaacatttcatgtcaattctgcacacaattccactgattgtggttgaaacaagg
agagaagttgatgaagtcaaggagttggttattattgtaaaggaatatgttcttagttta
aaaatggaactcaagaggagagaactgagagacaatccagtacgtcagcaggagcttgct
gcttatttcactcattgtaacctccagccaccacacatgagacttgctctgttgaatgct
atgactgtttgctacaaggcacaaaatctgagcactgcagccaactttgcccgacgactt
ctggagaccaatccaagtaatgagaaccaagccagaacagcccgccaggttctgcaggca
gctgagaggaacatgaccgatgccactcaactgaactacgacttcagaaatccttttgtg
gtctgtggggccacatttgtcccaatttacagaggacagaaagatgtaacctgcccatat
tgcactgcacatttcgttccatctcaacaaggtcagctctgtgctgtttgtgaccttgca
gagattgaatgtgatgcatcgggcttgctgtgctctccttcgcagatcagatga

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