Salvia miltiorrhiza (redroot sage): 131010306
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Entry
131010306 CDS
T09291
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
131010306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smil04147
]
131010306
Membrane trafficking [BR:
smil04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
131010306
Exosome [BR:
smil04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131010306
Exosomal proteins of bladder cancer cells
131010306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
131010306
NCBI-ProteinID:
XP_057793743
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Position
2:55097340..55103506
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AA seq
1217 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGTLRKKSTVSPADDIL
RLSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAW
EVDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILSAH
PEMNLLAAGHDSGMIVFKLERERPAFSVSADSLFYVKDRFLRVFEYSTQKDTQLIPIRRP
GSNNLNQAPRILSYSPTENAVLVCSDTDGGSYELYIIPKDSYGRGDVVQDAKRGTGGSAV
FIARNRFAVLERSTNQVLVKNLRNEVVKKSALPIATDAIFYAGTGNLLCRSDDKIVIFDL
QQRIVLGDLQTSFVRYVVWSSDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGAWDD
NGVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYMTKIYGSTIFCLDRDGKSRPIIIDSTEY
IFKLSLLRKRYDQVMSMIKNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALESGN
IEKALESAKKIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFHYLITGNLDKLS
KMMKIAEVKNEVMGQFHDALYLGDVKERVKILENAGHLPLAYITASLHGLHDIAEHLASN
LGENLPSLPEGKKASLLIPPSPVLCAGDWPLLMVSKGIFEGGLDEAGRGVVEDYEEAVDA
DWGEALDIGEVDDMKNGDIGMVVEEEDLHEENDEEGGWDLEDLDLPPETPEAATIARSSV
FVAPSPGMPVSQIWVQRSSLAAEHAAAGNFDTAMRLLHRQLGIRNFSPLRSQFIDLHMGS
HTYLPGCTSAPVVSVAVERGWSESASPNVRGPPALVFNFSQLDEKVRAGYKATTAGKFSD
ALKHFMSILHTIPLIVVETRREVDEVKELVIIVKEYVLSLKMELKRRELRDNPVRQQELA
AYFTHCNLQPPHMRLALLNAMTVCYKAQNLSTAANFARRLLETNPSNENQARTARQVLQA
AERNMTDATQLNYDFRNPFVVCGATFVPIYRGQKDVTCPYCTAHFVPSQQGQLCAVCDLA
EIECDASGLLCSPSQIR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagtaatagagttaaagggctgagcttccacagcaag
cggccatggatcttggcgagtctgcacagtggcgtcatccagctctgggattaccgcatg
ggcactctcattgatcgcttcgacgagcacgatggtcccgttcgtggcgttcatttccat
aaatctcagccactgttcgtttctggaggtgatgattacaaaatcaaggtgtggaattac
aaattgcaccggtgtctatttactctccttggtcatcttgattacatccgcacagttcag
tttcatcatgaatatccctggattgtcagtgcaagtgatgatcagacaattagaatatgg
aactggcagtctcgaacttgcatttcggtgttgacagggcacaaccattatgttatgtgt
gcctcatttcatcccaaagaagatcttgttgtttcagcctctttggatcagaccgtccgt
gtttgggatattggtaccttgaggaaaaaatccaccgtgtctcctgctgatgacattcta
cgactgtcgcaaatgaatgcagatttctttggaggggttgatgctgttgtcaagtatgtc
ctggaaggccatgatcgaggggttaactgggcttcctttcaccccactctccctttgatt
gtttctggtgcagatgatcgccaagttaaaatctggcgtatgaatgatacaaaggcttgg
gaggtagacacgttgagaggccacatgaacaatgtgtcgtgtgttctgttccatgcaagg
caggatatcattgtatcgaattccgaagacaagagtattcgagtttgggatgctactaaa
agaactggcctgcagacttttcgtagggagcatgacaggttctggatcctttcagcccat
cctgagatgaaccttctggctgctggtcatgacagtggaatgattgtctttaaattggag
agagaacgacctgccttctctgtcagtgctgattcactgttctatgtcaaggacaggttt
ttacgtgtttttgagtattcaactcaaaaagatactcaactgatccctatacgccgtcct
ggttctaataatttgaatcaagcacctcggatactttcttatagtcccactgaaaatgct
gttttggtctgttcagacacagatgggggatcatatgaactctacattatccccaaggat
agctatggaagaggtgatgtagttcaagatgcaaaaaggggtactgggggttcagctgtt
tttattgcccgaaataggtttgccgtgcttgagagaagcacgaaccaagttctggtcaag
aaccttagaaatgaagtagtgaaaaagagtgctctgcccattgctactgatgcaatcttc
tatgcgggcacaggaaatttgctgtgcaggtcagacgacaagatagtcatatttgatctg
caacaaaggattgttctcggtgatcttcagacatcttttgtgagatatgtggtttggtct
tcggatatggagagtgttgctttacttagcaaacactcaatagttattgcggataaaaag
cttgttcaccgttgcacccttcatgagactattcgtgtaaaaagtggagcttgggatgat
aatggagtcttcatctacacaactttgacccacatcaagtactgcctgccgaatggggac
agtggaatcatcaagacgcttgatgtccctgtgtacatgacaaagatatatggtagcaca
atcttttgcttggaccgagatgggaaaagccgtcctataattattgattctacagaatat
atttttaagctatccctgctgcgaaagaggtatgaccaagttatgagcatgattaagaat
tctgagttatgtggacaggccatgattgcttatctgcagcagaagggcttcccgcaagtt
gctctttattttgtgaaagatgagagaacacgctttaacttagcccttgaaagtggtaat
attgagaaggcacttgaatctgccaaaaagattgatgagaaagattactggtacaggctt
ggtgtggaggctcttcggcagggtaatgctgggatagttgaatacgcataccaaaagaca
aagaactttgagagattgtctttccattacctgataactggtaatctggacaaattgtcc
aaaatgatgaaaattgctgaagtcaagaatgaagtcatgggccagtttcatgatgcactc
tatcttggtgatgtgaaggagcgtgttaagattttggagaatgcaggtcacttgcctctt
gcatatatcacagcttcactccatgggctccatgatattgcagagcatcttgcttctaat
ctgggagagaatcttccttctcttccagaggggaagaaagcttcacttctaatacctccg
agtccagtgttatgtgctggagattggcctttgttaatggtcagtaaaggcatatttgaa
ggtggccttgatgaggcaggtaggggtgttgttgaagattatgaagaggcagtagatgct
gattggggtgaggctctggatattggtgaggtggatgacatgaagaatggagacattggc
atggtagtggaggaagaagatttgcatgaagagaatgatgaggagggcgggtgggatctc
gaagatcttgatctgcctccggaaacgccagaggcagctactattgcacgttcgtcagtg
tttgttgctccctcccctggtatgcccgtgagccagatttgggtccagagatcatctcta
gctgctgaacatgcagctgctgggaactttgacacagcaatgcgcttattgcaccggcaa
ttgggaataaggaatttctcccctctgcgatcacaatttattgatcttcacatgggcagt
catacctatttacctggttgtacctcggcaccggtggtatctgttgcagtagaaaggggt
tggagtgagtcagcaagtccaaatgtccgaggacctcctgcacttgtgttcaatttctcc
caattggatgaaaaggtcagagccggttacaaggctaccactgctggaaagttttctgat
gctcttaaacatttcatgtcaattctgcacacaattccactgattgtggttgaaacaagg
agagaagttgatgaagtcaaggagttggttattattgtaaaggaatatgttcttagttta
aaaatggaactcaagaggagagaactgagagacaatccagtacgtcagcaggagcttgct
gcttatttcactcattgtaacctccagccaccacacatgagacttgctctgttgaatgct
atgactgtttgctacaaggcacaaaatctgagcactgcagccaactttgcccgacgactt
ctggagaccaatccaagtaatgagaaccaagccagaacagcccgccaggttctgcaggca
gctgagaggaacatgaccgatgccactcaactgaactacgacttcagaaatccttttgtg
gtctgtggggccacatttgtcccaatttacagaggacagaaagatgtaacctgcccatat
tgcactgcacatttcgttccatctcaacaaggtcagctctgtgctgtttgtgaccttgca
gagattgaatgtgatgcatcgggcttgctgtgctctccttcgcagatcagatga
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integrated database retrieval system