Salvia miltiorrhiza (redroot sage): 131010608
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Entry
131010608 CDS
T09291
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131010608
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131010608
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
131010608
NCBI-ProteinID:
XP_057794195
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Position
2:complement(57887944..57907095)
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AA seq
640 aa
AA seq
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MSGIRILQLHIHTDNVVIDNGLVQLSLSNPGGLIRGIQYNGIDNLLELHNQDLNGGFYDL
NWSEEGASKTRGKFDTIEGTNFSVIVENEELVEVSFTRSWDPSVEGKQSPLSIDRRFVML
RDHPGFYSYAIFEHTEEYPGFNLNTARIAFMLRKDKFHYMAVADNRQRYMPLPDDRLPGR
GQELAYPEAVLLVDPVEPEFKGEVDDKYQYTLENKDNKVHGWICFDPPIGFWQISPSNEF
RNGGPFKQDLTSHVNPTTLAIFGTSHYAGEDLLLKFKHGEVWKKVFGPVFIYLNSVPDGH
DALSLWNDAKEQMKKEEEAWPYSFTASEDFPKSEQRGRVRGKLFVYDRYINKDKIPAGAA
YVGLAPQGDKGSWQRESKGYQFWSTTDEKGYFSVPNIRAGDYNLYAWVPEVIGDYKYEVA
LTITPGSDIDVGELTFEPPRDGPTLWEIGIPNRSAAEFYVPDPDPMYINKLYVDHPDRFR
QYGLWERYTDMYPDKDLVYTVGVSDYRKDWFYAQVTRKIADNIYKATTWQIKFSIDSVVE
GGIYKLRLALASAHNSNLQVCVNNADANPPLFSSGVIGGDNAIARHGIHGIYWLFNVDIA
AAQLMPGENTIYLTQTKSESPFQGIMYDYIRLEAPSHLDS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaattaggattctgcagttacacattcacacggataatgtagtaattgacaac
ggattggtgcagcttagtctgtctaatccgggggggctgataaggggcatacagtacaat
ggaattgacaatttgctggaacttcataaccaagacctcaatggcgggttttatgatctc
aattggagtgaagaaggggcctccaaaacaaggggaaagttcgacacgattgaaggaaca
aacttcagtgtcatcgtagaaaatgaagagctggtagaggtttccttcacaagatcatgg
gatccttcagttgaaggaaaacagtcgccactaagtatagataggaggtttgtgatgctc
cgtgatcacccaggattctactcttatgccatatttgaacatacagaggagtatcctggt
ttcaatcttaatacggccaggattgcattcatgcttagaaaagacaagtttcattacatg
gctgtggcagataataggcaaagatatatgcccctaccagatgatcggctacctggaaga
ggtcaagagctggcttacccggaagcagttcttcttgttgatcctgtggagcctgaattt
aaaggagaagtggatgataagtatcaatacacattggagaacaaagataataaggtgcat
ggttggatatgttttgacccacctattggcttttggcaaatttcacctagcaatgaattc
cgaaatggaggacccttcaaacaagacctgacctcccatgtgaaccctaccactcttgca
atatttggcacatcacactatgcgggagaggatcttttactaaaatttaaacatggagaa
gtatggaagaaagttttcggaccagtatttatttatctcaattctgtaccagacggacac
gatgcactttccctttggaatgacgccaaggaacagatgaaaaaagaagaggaagcatgg
ccctacagtttcacagcttcagaggattttcctaaatctgagcagaggggtcgagtaagg
ggtaaattatttgtatatgataggtacatcaacaaggacaaaataccagccggagcagcc
tatgttgggttggcaccacaaggagataaggggtcatggcaaagggaatccaaggggtat
cagttttggagcactactgatgagaagggttacttttccgtacccaatataagagctggt
gactataatctttacgcatgggtgcctgaagttattggagattacaagtatgaagtagca
ttaaccattactccagggtctgacattgatgttggtgaacttacatttgagccaccgaga
gatggtcctactttgtgggaaattggcatccctaatcgtagtgcagcagaattctatgtc
cctgatcccgacccgatgtacatcaataaactatatgtagaccatccagacaggtttagg
caatatgggctatgggaaagatatactgatatgtatcctgataaagatttagtgtacact
gtgggagtaagtgactatagaaaagattggttctatgctcaggttacgaggaaaatcgca
gacaatatatacaaggccacaacatggcaaattaaattcagcattgacagtgtggttgag
ggaggtatctacaaactccggttggcacttgcatcagctcacaactctaatttgcaggtt
tgtgtcaacaatgctgatgcaaaccctccattgttttcgagtggagtaatagggggagat
aatgcaattgctaggcatgggattcatggaatctattggttgtttaatgtggacatagca
gctgctcaactcatgccaggggaaaacaccatatacttgacacagacaaagagtgagagc
ccatttcaaggcattatgtacgactacattcgcctagaagctccgtctcatctagattct
taa
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