Salvia miltiorrhiza (redroot sage): 131010670
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Entry
131010670 CDS
T09291
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131010670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131010670
Enzymes [BR:
smil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131010670
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
131010670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
131010670
NCBI-ProteinID:
XP_057794289
LinkDB
All DBs
Position
2:complement(59263956..59289989)
Genome browser
AA seq
1454 aa
AA seq
DB search
MWNLSRAVLLGPLRLGFSLGTQAELLSRLILRPTPPFARHDSGGQASTRGYSPPRLSHSS
RRRALLRPRLPPAGVASRRFSFKGDEERSRQYAVHQAAIPGRRWSSKDGPPNKFGKCETC
GGNYHNCPGHCGFLTLALPVYNVGFLGAIVDIMKCICKKCSIILLDEKQRQDFLKKMRNP
KLEHLKKVELLKNIVKKCNGLAGSKRAVVCPRCGYINGMVKRVQLKIQHDRSKVADSADC
SLKECQSALSHTKGNANLSLNLDPKRAYELLKNMRDEDCELLYLDDRPENLMVTNILVPP
TAIRPSVFVDGGTQSNENDITERLKYIIQANASLRSEMVEKDSQSNRFMVSWQLLQEEVA
QYINSDVRGLTPQPLGNTRRPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLK
ITEVAIPILMARILTYPERVSHHNIEKLRQCVRNGPHKYPGAKFIRTPDGHEISLMYSAR
KHHADQLKYGCIVNRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYN
ADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDT
FYDRSDFSLMCSYIGDAMDPIDLPTPTLIKPVELWTGKQLFSVLLRPHAKMRVYLNLTVA
EKNYGKSRESMCSKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCM
NRLAKLSARWIGNHGFSIGINDVQPGYTLTNEKKALLDKEYGHCTNYIRSYTSGSLELLP
GCNNAETLEAKISETLNKIRETVASVCMDNLNWRNSPLIMSQCGSKGSPINICQMIACVG
QQSVGGHRAPNGFVDRTLPHFVRGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVD
TAVKTADTGYMSRRLMKALEDLSIFYDNTVRNASACIVQFMYGGDAMDPAQMEEKSGLPL
NFERLFMKAKATCPATEQKSLTSDEIEEVVKETLERKLLSMTSEGGRSESTPSSDTASKD
ECLEAFGKSISDFIKKKGPSSVLEKLKLSEGSHSEEDRCYLENVASSISGITQRQLMVFL
ETCICRYNSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN
AAKNMKTPIISTYLDVDNSEITAKMVKGRIEKTLLEQVARSIKTSQSSRLASIVVTLDMG
RIKEAYLHIDAYSVKESILRTPRMKLKEQHIRVLDEQKLEVILEADKSKLQFELHGLKNK
LSKVVVKGISSVERVIVLNEAKEKDTDGSKKLKLVAEGTDLLHVMGTEGVNGNKTESNNI
PEVHQVLGIEAARKKIIEEIKYTMSSHGMTIDIRHMMLLADLMTFKVILISSNHKYFMFM
TARTCIFCHSSNCSLRSSSRGLDIRALSKHLRSFVFKHEHQTARDVYSTFCVCHFKFCSV
FSYDEYCSRHTCDA
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatttgagccgcgcagttctcctcggtcctctccggctcggtttctctcttgga
actcaggcggagctcctctctcgtttaattctccgtccgacgccgccgttcgcgcggcac
gactcaggcggtcaggcgtccactcgcggctattctccgccgcgactcagccactccagt
cgccggagggctcttctgcggccgagactcccaccagccggcgttgccagtcgtcggttc
tccttcaaaggagatgaggagagatcaaggcagtatgcagttcaccaagcagccatacct
ggaagacgttggtcctcgaaagatgggccaccaaacaagtttggcaaatgtgaaacatgt
ggtggaaattatcataactgcccaggtcattgtggattcttgactctagcccttcctgtt
tataatgttggatttttgggtgccattgtggacataatgaagtgcatctgcaagaaatgc
tccataatactccttgacgaaaaacagcggcaagatttccttaagaagatgagaaatcca
aaacttgagcatttgaagaaggttgagttactgaagaatatagtgaaaaagtgtaatggc
ttggcaggaagtaagcgagctgttgtgtgccccagatgtggatatattaatggtatggtt
aaaagggtacaattgaaaatccaacatgatcgttctaaagttgctgacagcgcagactgt
agcttgaaggaatgccaatccgcgctttcccacacaaagggaaatgccaatttgtcttta
aatcttgaccctaaaagggcctacgagctactgaaaaatatgcgtgatgaggattgtgag
ttgctttatctagatgatagacctgaaaaccttatggtgactaatattcttgtgccacca
actgccatacgaccttcagtttttgtggatggtggaacacagagtaatgaaaatgacatc
actgagaggctaaaatacatcatccaggccaatgctagtcttcgctcagaaatggtggaa
aaagattctcaaagcaacagattcatggttagctggcagcttctgcaggaggaggttgca
caatatatcaatagcgatgttcgtgggttgacaccgcaacccctaggtaatactaggagg
ccattgagtggttttgttcagcgtcttaaaggaaagcagggaagatttcgtggcaattta
tcggggaagcgtgtagagtatactggcaggacagttatttctcccgatccaaatttgaaa
attactgaggttgctattccaattttaatggctcggattttgacttatcctgaacgagtt
tcacatcataatattgagaaattgcgacaatgtgttcgcaatggcccccacaaatatcct
ggtgctaagtttataaggacacctgatggtcatgagatatcattgatgtattctgctagg
aagcatcatgcagatcagttgaagtatgggtgcattgtgaatcgtcatcttgaagatggc
gatgtggttctatttaatagacaaccaagtctgcaccggatgtcaatcatgtcccatcgg
gcaaggataatgccttggcgtactctgagattcaatgagtcggtttgcaacccatacaat
gcagactttgatggtgatgagatgaatatgcatgtaccacaaacagaagaggcccgtact
gaggctcttatgctaatgggggtgcaaaacaatttgtgcaccccgaagaatggagaaatc
ttggttgcatcaacacaggattttctgacttcctcctttcttataacaagaaaagacaca
ttttatgaccgctcggatttttcactcatgtgttcttatataggtgatgctatggaccca
attgatttgccaactccaacattaattaaaccagtggagctatggactggtaaacagtta
ttcagtgtgctattgcggccccatgcaaaaatgagagtatatttaaatcttactgtagca
gaaaaaaattatgggaagtccagagaaagtatgtgttccaaggacggttttgtgtatatt
cgtaatagtgagctcatcagcgggcagcttgggaaggccacattaggaaatgggaataag
gacggtatttactccgttcttctcagggattatggtccccatgcggctgctacttgcatg
aatcgcttggcaaagttaagtgcccgatggataggaaatcatggattttcaattgggatc
aatgatgttcaacctgggtatacattaaccaacgagaagaaggcgcttctggataaggaa
tatggtcattgtaccaattacataaggagctatacatctggaagcctggagctgttacca
ggctgcaataatgctgagactcttgaagccaagataagtgagacacttaataaaattcga
gaaacagttgccagtgtttgcatggataacttaaattggaggaacagccctctaataatg
tcgcagtgtggttccaaaggttctcctattaatatctgccagatgattgcttgcgttggt
cagcaatctgtaggaggtcatagagctcccaatgggtttgttgatcgaacactgcctcat
tttgtaagaggagcaaaagatccagatgctaagggtttcgttcagaattccttttatact
ggtttatctgcgactgaattttttttccacaccatggggggcagagaaggtcttgtggat
acagcggtgaaaacagctgatacagggtacatgtctcgtagattaatgaaggctttggag
gacctatctattttttatgataatacagtgagaaatgctagtgcttgcattgtgcaattt
atgtatggtggtgatgctatggatcctgcacagatggaagagaaaagtgggctcccactg
aactttgaaagattatttatgaaagccaaggctacctgccccgcaacagagcaaaagagt
ttgactagtgatgaaattgaggaagtagttaaagaaacacttgagagaaagctcttatcc
atgacttctgaaggagggcgttcagagtcaactccttcatcagatacagcatctaaagat
gaatgcttggaggcttttggcaagtcaattagcgattttattaagaagaaggggcctagc
tcagtactcgagaagctgaaattgagtgaagggagtcattctgaagaagatagatgttat
ctggaaaatgttgcctctagtatatctgggataactcagcgacaattaatggtcttccta
gaaacttgtatctgtcgttacaattccaagaaaattgaagctggaactgcaataggtgcc
attggagctcagagtatcggagagccaggaacacagatgacattgaaaactttccacttt
gctggagttgcaagcatgaatgttacccttggagttcctaggataaaagaaatcatcaat
gctgctaaaaatatgaagacaccaattatttctacatatctagatgttgacaacagtgag
ataacagctaaaatggtgaaggggcgtattgagaaaacccttctggagcaggtagcccgg
agcatcaagacttcacaatcatcgaggttggcatccattgttgtaacacttgacatgggc
cgaataaaagaggcttacctacatattgatgcttactcggtaaaagaatcaattctacga
accccaagaatgaaactgaaagagcagcacattagagtattggatgaacaaaaacttgaa
gtcatcctggaagctgataaaagtaaacttcaatttgaactccatgggcttaagaataag
ctctccaaagttgtagtgaagggaatcagctctgtcgaacgggttatagtactaaatgaa
gcaaaagaaaaagatactgatggatccaaaaaattgaagttagtagcagaggggactgat
cttttgcatgtcatgggcactgaaggagttaatggcaacaagacagagagtaataacatt
ccagaagtacaccaggtactcggaattgaagctgcaaggaagaaaataattgaggagata
aaatacaccatgtcaagccatggcatgacaatagacatacgccacatgatgctgctggct
gacttaatgacatttaaggttattttgatttcttcaaatcataaatatttcatgtttatg
accgcaaggacatgtatattttgtcactctagcaactgttctttgagaagctcatctaga
ggtctagacattcgagcattgagcaagcatctaaggtcatttgttttcaagcatgaacac
cagactgcccgagatgtttattctactttttgtgtttgtcattttaaattctgttccgtg
ttttcgtatgatgaatattgtagtcgtcacacttgtgatgcataa
DBGET
integrated database retrieval system
