KEGG   Salvia miltiorrhiza (redroot sage): 131010686
Entry
131010686         CDS       T09291                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03082  ATP-dependent chromatin remodeling
smil03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131010686
   03083 Polycomb repressive complex
    131010686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smil03036]
    131010686
Enzymes [BR:smil01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131010686
Chromosome and associated proteins [BR:smil03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131010686
   HDAC complexes
    Sin3A-HDAC complex
     131010686
    BRAF-HDAC complex
     131010686
    REST complex
     131010686
    SHIP complex
     131010686
    MiDAC complex
     131010686
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131010686
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131010686
  Chromatin remodeling factors
   NuRD complex
    131010686
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131010686
NCBI-ProteinID: XP_057794327
LinkDB
Position
2:complement(58886403..58891272)
AA seq 464 aa
MDTGGNSLASGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHFLLAHYGLLQHMH
VLKPNPARDKDLCRFHADDYVSFLRSITPETQQEQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRHLLEEIRSKLLDNLSRLQHAPSVQFQERPPDSELPQMEEDHDGEDERYDPDSDMDI
DDERKPLPGRVKSEFPEPEPKDMDDAKEDEPNREVDLKCSEPLA
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggataccggaggcaattctttagcatctggagccgatggggtcaagcggaaagtaagc
tatttctatgacccagaggtcgggaattattactatgggcaaggtcacccgatgaagccg
cacaggattcgcatgacgcacttccttcttgcacattatggattgttgcagcatatgcac
gttctcaagccgaatcccgctagggacaaagatctctgcagatttcatgccgatgattat
gtttcttttctgaggagcatcacaccagagacgcaacaggagcagctcaggcagctgaag
aggtttaatgttggtgaagactgtcctgtatttgatggtctctactcgttctgccagact
tatgctggtggttcagttggtggggccgtgaagctgaatcatggacattgtgatatagca
gtgaattgggctggtgggttgcatcatgccaagaaatgcgaggcttctggtttttgctat
gtgaatgacatcgtgctggctatcttagaacttctaaaagttcatgagcgtgttctgtat
gtagacattgatattcaccatggtgatggagttgaggaagcattttacactacagacagg
gtgatgactgtttcctttcataaatttggagattattttcctggtacaggcgatgtacga
gacattggatatgggaagggaaaatattactctttgaatgttcccttggatgatggaatt
gatgacgaaagctatcagtctctatttaagccaataatgggaaaggttatggaaattttt
aaacctggtgctgtagtattacaatgtggtgcagactcgctgtctggagatcggttagga
tgctttaatctctccattaaaggccatgccgagtgtgtaaagtttatgagatcattcaac
gtgcctctactgttgttaggtggtggtggttacactatacgtaatgttgctcgttgctgg
tgttatgagacaggtgtagcacttggtattgaacttgatgacaagatgccacaacatgaa
tactatgaatattttggccctgattatactctgcatgttgctccaagtaacatggaaaat
aagaactcccgtcatttattggaagagatcagatcaaagcttcttgataatctctcaagg
cttcagcatgcaccaagtgtccagttccaggagcggccaccagatagtgaactaccacag
atggaagaagatcatgatggagaggatgagagatatgatcctgactctgatatggatatt
gatgatgagcgaaagcctctaccaggaagagtgaagagtgaattccctgaacctgaacca
aaagacatggatgacgccaaagaggatgagccgaatagggaagttgacctgaaatgctct
gaacccctcgcctaa

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