Salvia miltiorrhiza (redroot sage): 131011109
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Entry
131011109 CDS
T09291
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131011109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
131011109
Membrane trafficking [BR:
smil04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
131011109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
131011109
NCBI-ProteinID:
XP_057794867
LinkDB
All DBs
Position
2:complement(64203209..64220085)
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AA seq
791 aa
AA seq
DB search
MMISNGIEDEEKWLAEGIAGIQHNAFYLHRALDSNNLREALKYSAQLLSELRTSRLSPHK
YYELYMRAFDELRRLEIFFKEEDRHGCPVIDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILRDLVEMCRAVQHPVRGLFLRSYLAQVSRDKLPDIGSEYEGEGDTVMDAVEFV
LQNFTEMNKLWVRMQHQGPHREKEKLEKERNELRDLVGKNLHVLSQIEGIDLEMYRDTVL
PSVLEQIVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLSACPQLQPTVDLKTVLSQLM
ERLSNYASLNPELLPEFLQVEAFSKLSNAIGKVIEAQVDMPVVGAIALYVSLLTFTLRVH
PDRLDYVDQVLGACVKILSGKPKLEDSKATKQVVALLSAPLDKYDDIVTALTLSNYPRVM
DHLDAGTNKVMAMVIIRSIMKNKTWVSTSDKVEVLFELIKGLIKDLEGISTDELDEEDFN
EEQNSVACLMHMLHNDDPEEMLKIICTVWKHVMSGGPKRLPFTVPSLVFSALKLVRRLQG
QDGDVGGEEVPASPKKIFQLLNQIIEALSVVPAPELALRLYLQCAEAANDCDLEPVAYDF
FTQAFVLYEEEVADSKAQVTAIHLIIGTLQRVNVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQMTNVTRGSSGPVTLFVEIL
NKYLYFFEKGNPQITASVIQGLIELIKTEMQSDNAIANPVSDAFFTSTLRYIQFQKQKGG
AMGEKYDSIKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcaaacggaatcgaagacgaggagaaatggctcgccgaaggcatcgccgga
attcagcacaacgcgttctacttgcatcgagctttggactccaataatctccgggaagct
ctcaaatactccgcgcaattgttatcggagcttcgaacttcgaggctgtcgccccacaaa
tattatgagctctatatgcgggcttttgacgaattgaggaggttggagattttcttcaaa
gaagaagatcggcacggctgtccagtgattgatctatatgaacttgttcagcatgccggg
aacatcttgcctagattatatcttctatgcacagttggatctgtttatataaaatcaaag
gaggctcctgctaaggatattctcagggatcttgttgaaatgtgtcgtgctgttcaacat
cccgtccgcgggctttttctgagaagttatcttgctcaagttagtagagataagctacca
gatattggttcagagtatgaaggtgaaggtgatactgtcatggatgctgtggaatttgtg
ctgcagaatttcacagagatgaataaactatgggtccggatgcagcatcagggacctcac
agggaaaaagagaaacttgaaaaggaacggaacgaactgcgtgatcttgtggggaagaat
ttacacgtcctgagtcagatagaaggtattgaccttgaaatgtacagagacactgttctt
cctagtgtattggagcagattgtgaattgtaaggatgaacttgcccaatattatttgatg
gactgcataattcaagtctttccagacgagtaccacttgcagacccttgagacattattg
agtgcctgcccccaacttcaacctaccgttgacctgaaaacagtattatcccaactgatg
gagaggttgtcaaactatgcttctctgaatcctgaattgttaccagaatttttacaagtt
gaagcattttcaaagctgagcaatgcaattggaaaggtcattgaagcacaagttgatatg
cctgttgttggagcaattgctttatacgtttctcttctcactttcactcttcgtgtacat
cctgataggctggattatgtggatcaagtgctgggagcatgtgtcaaaatattatctgga
aaaccaaagcttgaagatagtaaagcaacaaaacaagttgttgcccttctgagtgctcca
cttgataaatatgatgatatcgtcacagctcttacactttctaattatcctcgtgtgatg
gatcatcttgatgctggaacaaataaagtcatggcgatggttatcatccgaagcattatg
aaaaataaaacttgggtttcaacttctgacaaggtcgaggtactatttgaacttataaaa
ggacttataaaggatttggaaggaatttctacagatgagcttgatgaagaggatttcaat
gaggagcaaaattctgttgcgtgcctaatgcacatgttgcataatgacgacccagaggag
atgttaaagataatttgtactgtgtggaagcacgtaatgtccggaggtccaaaacgccta
cccttcacagtcccatctcttgttttctctgctctcaagttggtgaggagactgcaaggc
caagatggagatgtaggcggcgaggaagttccagctagcccaaagaaaatatttcagctc
cttaatcagattattgaggctctttcagttgttcctgcacctgaactggcgttaagactg
tacttgcaatgtgctgaggcagctaatgactgcgaccttgagcccgtggcttatgatttt
ttcacacaggcctttgtcctatacgaggaagaagttgcggattctaaagcccaggtgaca
gctatacacctaataatagggactctgcaaagagtgaatgtattcggtgtcgagaataga
gataccttgactcataaagccacagggtactcagcgaaacttctaaagaagcctgatcag
tgcagagcagtttatgcatgttcacatcttttctgggttgacgatcaggatggcatcaaa
gatggagaaagggttctgctctgcttgaagcgttcattaaggattgccaacgctgctcag
cagatgacaaatgttaccaggggtagcagtggacctgtaactctcttcgttgaaatactt
aacaagtacctatattttttcgagaagggaaatcctcagattacagcttctgtgattcaa
ggcctaatagaattaattaaaaccgagatgcagagtgacaatgcaattgcgaatcctgta
tcagatgcattcttcacaagcaccttgcgttatattcaattccagaaacaaaaaggaggt
gctatgggggaaaaatatgattctattaagttgtga
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