Salvia miltiorrhiza (redroot sage): 131011205
Help
Entry
131011205 CDS
T09291
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131011205
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131011205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
131011205
NCBI-ProteinID:
XP_057794981
LinkDB
All DBs
Position
2:complement(11542462..11554696)
Genome browser
AA seq
632 aa
AA seq
DB search
MSKRNVTLSANGSNIIMDNGLVRLTIMKPQGLLTAIKYAGIDNLLDLKSNQLNRGYWDIN
WNLPGGQDRYQLLRGSEYNVINLSNDNVEVSFKSSYDPSIAGTRLPLSVDQRYIVRSGVS
GFYCYAIYERPQGCPAFDLAQTRMVFKLHRDRFHYMAITDEKQRIMPMPDDLLPGRGKQL
IVPESVLLLNPINPDLKGEVDDKYQYSMDNKDGGVHGWISSNPSVGFWIIFPSHEFRNGG
PTKQNLTCHTGPTCLAMFHGSHYIGDDMVAHFEQGEVWRKVLGPFFVYLNTTKDVSQSYN
LWTDAKKQRLTEESLWPYDFISSPYYLTYKERGSATGRLFVQDRYVSESLIPAKSAFVGL
SAARTAGSWQIESKDYQFWVQTDIEGNFSIKNVVPGVYGLHGWVPGFIGDYLNQQLLTIS
AGSETQVGNVRYVAPRDGPTVWEIGYPDRTAAKYFVPDVNPIYVNKLFLNTPEKYRQYGL
WDRYTDLNPKSDQIYTIGVSDAKKDWFFAHVDRRIGDNKYVPTTWEIRFNLKLVVAGIYK
LRLALASATRSDLEVHVNQMNAEQLVFQVINLGADNAVCRHGIHGLYQLFIVDISSTLLI
NGDNCLFLTQARAGDALCGILYDYLRLEAPSN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaaatgtaactctgtctgccaatggttccaatattataatggacaatgga
ttggtacggcttacaataatgaaaccacaaggactgctgaccgccataaagtatgcagga
atagacaatttattagacctcaaatccaaccaacttaaccgaggttactgggacataaac
tggaacttgccaggaggccaggaccgataccaattgctaagaggatccgaatacaacgtg
ataaacttgagcaacgataacgtggaggtgtcgtttaagagtagctacgatccttcgatt
gctgggactagacttcccctcagtgtagatcagagatacattgtaaggagtggagtatcg
ggtttctactgctacgccatctacgagcggcctcaaggatgccctgcattcgatcttgct
caaacacgaatggtctttaagctgcatcgcgacaggtttcattacatggcgatcacggac
gagaaacaacgcataatgccaatgccagatgatctgttgccagggagaggcaaacaactt
attgtacctgagtctgttttgcttcttaatcccattaatccagacctcaagggagaggtt
gatgataaataccaatattcgatggacaacaaggatggtggggtccatggatggataagc
tccaaccctagtgtgggcttctggatcatcttccccagccatgagtttcgcaatggcggg
cccaccaagcaaaatctcacgtgccacaccggtcccacttgcctcgctatgtttcacgga
agccactacattggggacgacatggttgctcatttcgaacaaggtgaagtatggagaaag
gtgttgggccccttcttcgtctacctcaacaccaccaaagatgtttcccagtcttacaat
ctatggacagatgcaaagaagcagaggctaacggaggagtcgttatggccgtacgatttc
atctcttcaccatattatcttacgtacaaggagcgcggctctgctacaggaagactcttt
gtccaagatagatatgtttcagaatccctcattcctgctaagtctgcatttgttgggctg
tcagctgcaagaacggcgggctcttggcaaatcgaaagcaaggattaccaattctgggtg
cagacagatatagagggaaactttagcataaaaaatgttgtaccaggagtttatggcctt
catgggtgggttccagggtttattggtgattacctcaaccaacaactccttacaatctct
gcaggatcagaaacacaggtaggtaatgtgaggtacgtggctccacgagatggcccaacc
gtgtgggagattggttaccctgatcgcaccgcagctaaatattttgtgccagatgtcaac
cccatctatgtcaacaagttgttcctcaacacccccgaaaagtatagacaatatggacta
tgggatagatacacagacttaaatcccaagtctgatcaaatctatactataggcgtgagt
gatgcaaagaaagactggttctttgctcatgtggataggaggattggagacaataagtat
gttccaacaacgtgggagatcagattcaacctgaaattggttgttgcaggaatttacaag
ttgagattggctcttgcctcagccacccgctccgacttggaggttcatgttaatcaaatg
aatgctgagcaactagtgtttcaagtgataaatttgggagccgacaacgcagtttgtcga
catggaatccatggactttaccagctttttattgttgatatttcatcgacattgttgatc
aacggcgacaattgcttgtttctcacccaagcaagggctggtgatgcactttgtggaatt
ctttacgattacttaaggctagaagctccatcaaattga
DBGET
integrated database retrieval system
