Salvia miltiorrhiza (redroot sage): 131011229
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Entry
131011229 CDS
T09291
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131011229
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131011229
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131011229
NCBI-ProteinID:
XP_057794996
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Position
2:complement(12179393..12184419)
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AA seq
398 aa
AA seq
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MAKYTSLFILTWLFAYCISKNIAHSSHHKTQNKTSPHSNIPTYPRPTSKLMNKIDSCWRP
DPNWILTRKKLADCAIGFGSGAMGGKNGAIYVVNDPSDDPINPKSGTLRYGAIQAQPLWI
IFESDMAITLENELIVNSYKTIDGRGFRVEISNGPCITVEGVSHVIVHGLSIHDCKPGKP
GLVRSSPDHVGHRLGSDGDAITILGSSNIWIDHCYLASCTDGLLDVTHASNFVTLSNNYF
TQHDKVMLLGHNDEFTDDKIMKVTVVFNHFGPGLVQRMPRVRYGYAHVANNRYDEWIMYA
IGGSADPTILSEGNYFAASNQPHAKEVTKRETRNNWKSWKWRSTKDVFINGAYFVPSGYG
SVAPNYLPSQNFAVALGSMAPALTSDAGPLFCSPHQQC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatacacttctcttttcatacttacatggctatttgcctattgcatttcaaaa
aatattgcacattcatctcatcataaaactcaaaacaaaacgtcaccacattctaacatc
cctacatatcctcgcccaactagcaagttgatgaacaaaatcgactcatgttggaggccc
gacccaaattggatcctaacccggaaaaaattagccgattgtgccataggatttggcagt
ggagccatgggagggaagaatggggctatatacgtcgtaaatgacccgtctgatgatccg
attaaccctaaatcgggtacgctccgttatggtgcaatccaagcccaaccactatggatc
atattcgaaagcgacatggctattactcttgaaaacgagttgatcgtgaatagttataag
accattgatggtagagggttccgcgtagagatatcaaacgggccgtgcattactgtcgag
ggcgtgagccacgttatagtccatgggcttagcatccacgactgcaagcccgggaagccc
ggcttggtccggagtagcccggatcatgtcgggcataggcttggtagcgatggagatgct
attactattcttggttcgtccaatatatggatcgatcattgctaccttgctagttgcaca
gatggtctccttgatgtcacacatgcatctaattttgttactctttccaacaattacttc
actcagcatgacaaggtgatgttgttgggacataacgatgaatttacagatgataaaatc
atgaaagtgacggtagtttttaatcactttggccctggattggtgcaaagaatgccaaga
gttcgatacggttacgcccatgtagccaacaacaggtacgatgagtggataatgtatgcc
attggtgggagtgccgatccaactatactcagtgaggggaattattttgcagcttccaat
caacctcatgctaaagaggtgacaaaacgcgagacgaggaacaattggaagagctggaaa
tggagatccacgaaggacgtattcataaatggggcgtattttgtgccatcaggatatggg
agtgttgctccaaattatttgccatcacaaaactttgcagtcgctttgggatcaatggct
cctgctttaacatctgatgctggccctctcttttgttcacctcatcaacagtgctga
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