Salvia miltiorrhiza (redroot sage): 131011579
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Entry
131011579 CDS
T09291
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
131011579
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131011579
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
90S particles
Helicases
131011579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
131011579
NCBI-ProteinID:
XP_057795334
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All DBs
Position
2:22175169..22180780
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AA seq
748 aa
AA seq
DB search
MREPKSRKFKLQKRLTEVQEIELLESWIDSCKPDSGSNPLSLSPPSKKSPIGRLPDGSFS
PYAGADKFFQLPLSKRTKDGLVASGFSKMTDIQKASLPHSLCGRDILGAAKTGSGKTLAF
VIPVLEKLYRARWGPEDGVGCIIMSPTRELADQLFEVLKNVGRHHGFSAGLLIGGRKDVD
DEKERINELNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDVGFKKELNAIISQ
LPKQRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESTTATPNRLDQTAMIVPLDQKLD
MLWSFIRTHLNSRILVFLSSCKQVKFVHEAFKKLRPGIPLKCLHGRMKQDGRMGIYASFC
EQRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGRSVLFLAPS
ETKMLDNLQEKKIPIRIIKANTKRLESVSGSLAALLVKYPNLQSLAQRAFITYLKSIHKQ
RDKDIFDVTKLPIDEYSASIGLPLTPRVRFLKQKVKGKKVSEDLALVPESHSDVNPSELL
RGTTNAVRPEKAEIELEESFLLEKKAQPLGDENVTDIRDDMSATRVLKKKKLKINVHRPV
GTRVVFDDEGNTLPPLATLADSNTGSDSVKLDKDKVSQRYAELREMMKLVDKEDKALEHK
RRKEKRIKQKMKLKRGREDDDDDAVSEDDLSGSDGEATINRPNKKGKKYFNSDSDNDDDE
RRKGENSTTPITLAEQEELALKLLSSMQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagagaacctaaatccaggaaattcaagctccagaaacgcctcacagaagtccaagaa
attgagctcctcgaatcatggattgattcgtgcaaacccgactccggctctaacccgctg
tccctttctccaccgtcgaagaagtcgcctatcggcaggcttcctgacggctccttttct
ccctatgccggcgccgacaagtttttccaactgccgctatcgaagaggaccaaggatggc
ttggtcgcctctggtttctcgaagatgaccgacattcagaaggcttctctaccccactcc
ctctgcggcagagatatcttgggagctgctaaaactggctccgggaagactctggcgttc
gttatcccggttttagagaagttatatcgagctagatggggtccagaggatggggttgga
tgcataatcatgtctcctacaagggaattagctgaccagctttttgaagttctaaaaaac
gtaggaaggcaccatggatttagtgctggacttctaattggtggtcgtaaagatgttgat
gatgagaaagagcgtataaacgagttgaacattttagtctgtactcccggaagacttctc
caacacatggatgaaactccaaattttgaatgctcacaacttcaggtgttagttcttgat
gaggcagatcgtattcttgatgtgggattcaagaaagaattaaatgctataatatctcaa
ttaccaaaacaaagacaaacctttcttttctcagccacgcaaacaaagtctgttcaagat
cttgcaagactcagtctaaaagacccagagtatcttagcgtgcatgaggagtctactact
gctactccgaatcgtttggaccagactgctatgattgttccccttgaccaaaagcttgac
atgctttggagttttataaggacacacctcaattcaagaattttggtgtttctttcgagc
tgcaagcaggtaaaatttgtgcatgaagctttcaagaaactccgaccaggaattccgttg
aaatgtcttcatggaaggatgaagcaagacggacgtatgggaatctatgcatcattctgt
gagcagcggtccgttttgttttgcactgatgttgcatctagaggccttgatttcaacaag
gctgttgactgggttgttcaggtagattgcccagaagacgttgcttcttacatacacaga
gttgggagaactgctcgttaccattcgggtggaagatctgtcttattccttgccccctca
gagacaaagatgcttgacaatttgcaagaaaaaaagattcctattcggatcattaaggca
aatacaaaaagattggaatctgtttctggttcattggcagctttgttagtcaagtatcct
aatctacagagtctggctcagagagccttcattacttatttgaagtccatccataaacaa
cgcgataaagacatttttgatgtcactaaacttccaattgatgaatattctgcatcaata
ggtcttcccctgactcccagagttcggtttctaaaacaaaaagttaagggtaaaaaagtt
tctgaagatcttgccctggtgccagaaagccattctgatgtaaatccttctgaactctta
agaggaactacgaatgctgtgaggccggagaaagcagaaattgaattggaagagagtttt
cttttggaaaagaaagcacagcctttaggggatgaaaatgtaactgatattagggatgat
atgtctgctacaagggtcttaaagaaaaagaagttgaagatcaatgtgcacagacctgtg
ggtactagggttgtatttgatgatgaaggcaacaccttaccacctcttgcaacactagct
gactccaatactggatctgattccgtcaagctggacaaggacaaagtaagtcaacgatat
gcagagttgagagaaatgatgaaattggttgacaaggaagataaagccttggaacacaag
cgtcggaaagaaaagcgtatcaagcaaaagatgaagttgaaaagaggtagagaagatgat
gatgatgatgcagttagtgaagatgatctatctggttcagacggagaagcgactataaac
agaccaaataaaaagggcaagaaatatttcaacagtgatagtgataatgatgacgacgag
aggaggaaaggcgagaacagcacaactccgattacactggcggagcaagaagaactggct
cttaaactgctcagttcaatgcaataa
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