Salvia miltiorrhiza (redroot sage): 131011601
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Entry
131011601 CDS
T09291
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03030
DNA replication
smil03410
Base excision repair
smil03420
Nucleotide excision repair
smil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131011601
03410 Base excision repair
131011601
03420 Nucleotide excision repair
131011601
03440 Homologous recombination
131011601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
131011601
03400 DNA repair and recombination proteins [BR:
smil03400
]
131011601
Enzymes [BR:
smil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131011601
DNA replication proteins [BR:
smil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
131011601
DNA repair and recombination proteins [BR:
smil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
131011601
NER (nucleotide excision repair)
GGR (global genome repair) factors
131011601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
131011601
NCBI-ProteinID:
XP_057795352
LinkDB
All DBs
Position
2:22576470..22583545
Genome browser
AA seq
1085 aa
AA seq
DB search
MAKMGFSAPTAPFRPSSFCPPYFWFCRSCIKFYSVSSSTKVFCRVEDKATRSAHSGITNG
AISADVLELNQKSNYSTFQHNENQMIYRERSDFTYKWKKKPSFNREAEAIEEDSQGILTE
VLNTAQTTNDCGHTIEDWGKATEEYRINKRLFVHGTNTSAKLKTTSEGDNRRKTIYEGEG
RALSRNEVKYTGNGRQHVHHISHNQVSVGQVGSHVVPLPKNDKKIVLDGHLMEKDAHPSC
WGIKSVQGPKPDKDEVFHNKETASADNEVVPSDDVGEPLSEKITGPEYSELHERLGQVYE
KVLIVDSIPAAREVVRLLTTQYKDLVHACDTEASNIDVKDDSPVDHGEVICFSIYSGPDA
DFGNGKSCIWVDVLDGGGEGLIKEFAPFFEDPSIKKVWHNYSFDNHVIENYGLKLSGFYA
DTMHMARLWNSSRRTEGGYSLEALTRDSIVMSDARKGPGQQVLGKVSMKNIFGRKKLKKD
GSEGKIIAIPPVEELQRDERKLWICYSALDSISTLSLYESLEKKLLKTPWSVDGQYQGSM
FDNYCKYLRPFGELLVKMEREGMLVDRSYLAEIEKVAKVEQQIAADRFRKWATKLCPDAK
DMNVGSDAQLRQLFFGGVQNRKDPNEFLPVKKDFKVPNVGNIIEEGKKKATKYRKIVLSK
PEGVNIVADKFTPSGWPSVSGDALKTLAGKVSADFDFLDEEDDEEIPEEENQNSLKDNGA
PQSGDRDISAYGTAYSAFGGGQAGIEACHAIAALCEVCSIDSLISNFILPLQGNHIAGKD
GRIHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRI
LAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIRKAVEDKEVLLEWHPQSDEDKPPAPLLK
DAFGSERRKAKMLNFSIAYGKTTVGLARDWKVSREEAQETVNLWYSDRQEVLHWQTLRKK
QAHNYHCVYTLLGRARHFPSLKNASSAHRAHIERAAINTPVQGSAADVAMCAMLQISRNK
RLKELGWRLLLQVHDEVILEGPSESAEEAKAIVVDCMSRPFEGKNILRVGLSVDAKCAQS
WYAAK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatgggattttctgcgcccaccgcccctttccggccctcgtcgttttgcccg
ccgtatttctggttttgccgctcttgcattaagttctactccgtttcttcttcgaccaaa
gttttctgcagggtggaagataaagcgacccgaagtgctcatagtggcatcaccaatgga
gctatcagtgctgatgtgcttgaattaaaccaaaagtcgaactacagtacatttcagcac
aatgagaatcaaatgatttatcgagaaaggagtgattttacatataagtggaaaaagaag
ccctcttttaatagagaggcggaagcaatagaggaagacagtcaaggaattttgacggaa
gtattaaataccgcacaaactaccaatgactgtggacatactattgaagactggggtaaa
gctacagaagaatatagaataaacaagagactgtttgttcatgggactaacacttctgca
aagcttaaaacaacttcagaaggcgataataggagaaaaacaatatatgaaggagaaggg
agagcattaagcaggaatgaggtgaagtatactggaaatggcaggcaacatgtgcatcat
atttcccataaccaggtatctgtaggtcaggttggatctcatgtagttcccctcccaaag
aatgataagaagatagtattggatggccatttaatggaaaaagatgctcatcctagttgc
tggggcattaagagtgttcaaggtcccaaacctgacaaggatgaagtattccataataaa
gagacagcttctgctgataacgaagttgttccaagtgatgatgttggtgaacctttgagt
gagaaaatcactggtcctgaatactcggaacttcatgaaagacttggtcaggtctatgaa
aaggttctcattgttgatagcatacctgcagctagggaagtagtccgtctgctcactact
caatacaaggatcttgttcatgcctgtgatacagaggcatcaaatattgatgttaaagat
gattcacctgtggaccatggtgaagtgatatgtttcagcatatattctggcccagacgct
gattttggtaatgggaagtcctgtatctgggtggatgtccttgatggaggtggtgagggt
cttatcaaagaatttgctccattttttgaagatccgtctattaaaaaagtgtggcacaac
tacagcttcgataatcatgtaatagagaattacgggcttaaactttctggtttctatgct
gatacgatgcacatggctcgattgtggaattcctctcgacgaacagagggagggtattct
ttggaagcactcacaagagattccattgtcatgtcagatgctaggaaaggccctggtcaa
caggttcttgggaaggtgtcaatgaagaacatttttggtcggaaaaaacttaagaaagat
ggatctgagggtaaaataatagccattcctcccgttgaagagctacaacgagatgagaga
aaattatggatttgttattctgctctggattcgataagcacattgagcctgtatgaaagc
ctggagaagaagttgttgaaaaccccttggtctgttgatggacaataccaagggtcaatg
tttgacaactactgtaagtatttacgtccatttggagagctccttgttaaaatggagaga
gagggaatgctggtcgatcgctcttatcttgctgaaattgagaaggttgctaaagtagag
cagcagatagctgctgatagatttcgcaagtgggccactaaactttgccctgatgcaaaa
gacatgaatgtaggaagtgatgcacagttgcgccagttattctttggtggtgtacagaac
aggaaggatccaaatgagtttcttcctgtgaagaaagattttaaagttcccaacgtgggt
aatataattgaagagggcaaaaagaaagccacaaaatatcgtaaaattgtattgagtaag
cctgaaggtgttaacatagtagctgataagttcactccaagtgggtggccttctgttagc
ggggatgctttgaagactcttgcgggcaaggtctctgcggactttgattttctggatgaa
gaggatgacgaagaaattcctgaggaagagaaccaaaactccttgaaggacaatggagcg
ccccaaagtggagacagagatatctctgcttatggaactgcttactctgcatttggtggt
ggacaggcgggaattgaggcttgtcatgccattgctgctctatgtgaagtttgctctatt
gactctttgatatccaactttattctccccttgcagggaaatcacattgcaggcaaggat
gggagaatccattgttctctgaatatcaacacagaaactggccgactgtctgctagacga
cctaatctgcagaaccagccagcactggagaaggatcgttacaagatccgtcaggcattt
atagcagcacctggaaactctctaatagttgctgattacggacagttagagcttaggatt
ctagctcatctggccaactgtaagagtatgcttgatgcttttaaagctggtggagacttc
cactcaaggactgcaatgaacatgtatccacacattcgtaaagccgttgaggataaggaa
gtgcttctcgagtggcatcctcagtctgatgaagataagcctccagccccgttgctaaag
gatgcttttggttcggaaagaaggaaagctaagatgcttaacttttccattgcatatgga
aaaacaactgttggacttgctcgggactggaaggtttctcgcgaggaagctcaggaaaca
gttaatctctggtacagcgatagacaagaagtactacattggcagacactacgcaagaaa
caagcacataactatcactgtgtttacacattgttagggcgagctcgccacttcccatct
ctaaagaatgccagctctgcacatagagctcacatcgaacgtgctgctatcaataccccc
gtgcagggaagtgctgcagacgttgctatgtgtgccatgttgcagatatcgaggaacaaa
cgtttgaaggagctaggatggcgacttctgttacaggttcacgacgaagtgatcctagaa
gggccaagtgaatcggctgaggaggccaaggctattgttgttgattgcatgtcaaggccc
tttgaaggcaaaaatattcttagagttggtttgtctgttgatgccaaatgtgctcagagc
tggtatgctgccaagtag
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