Salvia miltiorrhiza (redroot sage): 131011893
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Entry
131011893 CDS
T09291
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
131011893
03400 DNA repair and recombination proteins [BR:
smil03400
]
131011893
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
131011893
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
131011893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_EF3_N
HEAT_GCN1_C
Cnd1
HEAT_GCN1
HEAT_MROH2B_C
TPR_DNAAF5
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
131011893
NCBI-ProteinID:
XP_057795772
LinkDB
All DBs
Position
2:complement(48826093..48844116)
Genome browser
AA seq
1394 aa
AA seq
DB search
MAEARKKQQAAKQLLKQIGEQLVACETCPDESIIVKLLKKATSAFMELKQSDSENHSSKP
PGNSRTRQGILDQRDRDACVLAPDPAFSHAVSSKIFRFLLRMFEELHDTSSKYFRTRAKI
LETVDKLQFCLVMLDTGCEDLVLKMFKSFFSVVREDHPQSLIDSISSIITSILAENVEAD
PDPLERNTFQPLLDVILRNIIREKKAAASASYRLAASVVQNCSEKLKCYICRFLTSCILN
RDAVGSPFKESYHEIILEIYQVAPELLLSVIPHLTHELLTDQVDVRIKVLNLIKKLLMLQ
GKNVAREYPCVLNELLNRFSDKSAEVRLTALTSAKALYITNLSGKDSLEALFTAIGGRLL
DHDDKVRMEAVNVVCELAKTNLNRISSDLITQAAERLRDKKVLVRSKAFEKLVELYQEYC
TRLAACITSFNEKVEEIPCKFLMLCYEKDCQEFRPQAMELVLVDLFPACLPIEEKTKHWI
SIFSHFKPPHHRALKIILSQKRRLRDGMKHYLDLCRRTEDTGPGETDREIDALVVKMCSC
FQYPAKAKDCFQKLKELRDNRVFSVLEKFLKENSADSDTIKDVYLKELGEHRALSEFFHL
LFKKCAFNIFGIEHVSYILDCLSSEDAEEKRLKNYYAQLLLTIISAFPSLLKGSETEFQQ
LILEREIPFNEQLIEMLAREGCHMPVKLSDVYPFLEKVCLEGTRSQSKLAVTAICALVDT
SEQFIYPQLCKILVDSLQSGKNAPTVLQSLGCLAQYSVSTFESQEKVITNYILEKIFQQN
DDLALKDLEPSTYCSVCELKVYGLKTIVRSFLPHKNAYLGRPLSFLLEIIQQMLQNHHSS
AGCIQCGRDEAFIRLAAAKSVLRLSRKWDLHISPEIFRLTILVAKDPSPIVRRSFTTKLH
KLLLSHAVPIRYACAFSFVALDPLEDLCSNALKYLEEFIREYGKRVQIHETMTTDRAATH
CACLVVFLIHVLVHDHNFPAPDCEDVKIYAEFMSPLFVTVQSLNGNLVDHNLRSIFSALK
KAEDAIDAQMTPKVRLLAEVGLSILDSLNTKITPLGHTPAIVLLPSSLYKNGSSKMREAD
PYSSLCCKANPCFTKNLVSSLKAEVFLIGSTGTKHKHQFTENSLRPSGTRHIKPSPTYGY
KEKLLMDKTKEQVVELQIGQKEQLDSSNYEADTRGQQNLAMLPLLGTVVLDNKLSAAEDR
NKTDACRELEVTPSDHCDLMSKSSLPHDEFVVSCPRNKDSTNKTGSFPAEPSGSSTSSDQ
VNHLTSKNTENIENNGGGLNSKHIKTCTPTEECCSVVEDSFDSTKITHQDLDDPLPQNCD
QSSSCTANAEAENLDSYACDSKEANLPKKRDLRIRKVPQAAKRSKQLHDPIGTASSEVLD
LSGNQPRRSKRLKV
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcgtaagaagcagcaggcggccaagcaactactaaagcaaatcggcgag
caactcgtcgcctgcgaaacttgcccagatgagagcattatcgtcaaactactcaagaaa
gctacaagtgcattcatggagttaaagcagtcagactcagaaaatcattcatccaaacca
cctggtaattctcgaacgaggcaaggcatacttgaccaaagagacagagatgcttgtgtt
ctcgcaccagatcctgcttttagccatgcagtttcgtcgaagatttttagatttctttta
cgcatgtttgaggagcttcatgacacctccagcaaatatttccggacacgggccaaaata
ttggagactgttgataaactgcagttttgtttggtaatgcttgatactggatgcgaagat
ttggttctcaaaatgttcaaaagcttcttcagtgttgtaagggaggatcatcctcaaagt
ttgattgattcaatttcatcaatcatcacaagcatcttggcggagaatgtggaagcagac
cctgaccctcttgaaaggaatacatttcagccactgttagatgtgattctacggaatatt
attagggagaagaaggctgcagcatctgcttcctatcgactagctgcttctgttgtacaa
aattgtagtgaaaagttgaagtgctatatatgtcggttcttgacgtcatgcatattgaat
agagatgcagttgggagtccgtttaaagaatcttatcatgaaattatacttgaaatctac
caagttgctcctgagttgcttctctctgtcatacctcatttgacccatgaattactgact
gatcaggttgatgtccggattaaggttcttaatttaataaaaaagctcctaatgttgcaa
gggaaaaatgttgcacgggaatatccatgtgtcttgaacgagttgctgaatagattctca
gacaagtctgcagaagtgaggcttactgctcttacttctgctaaagcgttgtacatcact
aatctatctgggaaagattcacttgaggcactcttcactgccattgggggtcggctgtta
gatcatgatgacaaagtgagaatggaagcagtgaacgtggtatgtgaactagctaagact
aacttgaatcggatatcctcagatttaataactcaagctgccgaaagacttcgggacaag
aaggttttggtcagaagtaaagcctttgaaaagttggtagaactataccaggaatactgc
acaaggcttgctgcatgcataacctctttcaatgaaaaagttgaagaaattccttgcaaa
tttttgatgctttgttatgagaaagactgccaggagttcaggccccaagccatggagctt
gtgctagtggatctgtttcctgcttgtcttccgattgaggaaaaaacaaagcattggata
tctatattttcgcacttcaagcctcctcatcatagggcactgaaaattattctatcacag
aaacggaggttaagggatgggatgaagcattatttggacctgtgcagaagaacagaggat
actggtcctggagaaactgacagagaaatagatgcactggttgtcaaaatgtgctcatgc
tttcaatatcctgccaaggcaaaagattgttttcagaaactaaaggaactcagagataat
agggtttttagtgtgttagagaagtttctaaaagaaaattcagctgactctgacaccata
aaggatgtatacttgaaagagctcggggaacatagagcactttccgaattctttcatcta
ctttttaaaaagtgtgcctttaatatatttggcattgagcacgtcagctatattttagat
tgtctatcaagtgaagatgcagaagaaaagcgcttaaaaaattattatgcgcagcttctt
ctgacaattatcagtgccttcccctcactgcttaaaggatcagagacagagttccagcaa
ttgatacttgaaagggagattccttttaatgaacagttgattgagatgttagctagagag
gggtgtcatatgcctgttaagctcagtgatgtataccctttcctggagaaagtatgttta
gaaggaactcgttcacagtctaaacttgctgttactgcaatatgtgcattagttgatacc
tctgagcaatttatttaccctcaactttgcaagatactagtggattctctacagagtgga
aagaatgctcctactgttttgcagtccttgggctgtctggcacaatattccgtttcaaca
tttgaatctcaagaaaaagtgattacaaattacattcttgagaaaatatttcaacaaaat
gatgatcttgctttaaaggatcttgagccttcaacttattgcagtgtttgtgaattaaag
gtttatgggcttaaaacaattgtgaggagctttctaccacataaaaatgcatatcttggt
cgtccattgagttttttgcttgagattatccagcagatgctacaaaatcatcactcgtct
gctggctgcatccaatgtggacgtgatgaggccttcatccgattagctgcagccaagtct
gttcttcggctttcaaggaaatgggatttgcatatttctccagagatattccgcttaaca
atattagtggccaaggatccttctccaattgttcgcaggtcatttactaccaaactacac
aagttgttgctaagtcacgctgtgcccattagatatgcatgcgccttttcttttgttgct
ttagatcctctcgaagatttgtgcagtaatgccttaaagtatttagaagaatttattcgt
gaatatggtaaaagagttcaaatccatgaaaccatgactacagacagagcagctactcac
tgtgcatgcctagttgtgtttttgatacatgttcttgtgcatgaccataatttccctgct
ccggactgtgaagatgtaaagatatatgctgagtttatgagtccactctttgtcactgtg
cagtcactgaatggtaatttagttgatcataacttgcgaagtatttttagtgcattgaag
aaggctgaggatgctattgatgctcaaatgactccgaaggtgcgtcttttagcagaagtg
ggactctctattttagattctttgaataccaaaatcacgcctctcggccatactcctgcc
atagttctacttccatcatcactatacaaaaatggttcttctaagatgagagaggctgat
ccctactcttcactttgttgcaaagctaatccatgctttactaagaatttggtttcgagc
ctcaaagcagaggtttttttgattggtagcaccggcaccaagcacaaacatcagtttact
gagaattctttacgaccaagtggcactaggcacatcaaaccaagtcctacatatggttat
aaagagaaattgttgatggataaaactaaagagcaggtcgttgagctccaaataggacaa
aaggagcagttagattcttccaattatgaagctgatacaagaggacagcaaaacctggcc
atgctgcccctacttggaactgttgtactggacaataagctttctgctgctgaagataga
aacaaaacagatgcttgtagagaactggaagtcacaccctcagaccattgtgatttgatg
tcaaaatcctcattgcctcatgatgaatttgttgttagttgtccaagaaacaaagattca
actaataaaacaggcagctttcctgctgagccatctggatcatcaacatccagcgaccaa
gtgaatcatcttacgtctaagaatacggagaatattgaaaacaatggtggaggattaaac
agcaaacatattaaaacatgcactccaactgaagaatgctgttctgttgttgaggacagt
tttgattccaccaagatcactcaccaggatttggatgatcccctaccacaaaactgtgat
caaagcagcagttgtacagctaacgctgaagcagaaaacctggattcatatgcatgtgat
tccaaagaagcaaatttgccaaagaaaagagatctccgcatcagaaaagttcctcaggct
gcgaaaagaagtaagcaattgcatgatcccattggaacagcaagctctgaagtccttgat
ttgagtggcaaccagccaaggcggagcaaaagactgaaagtttga
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integrated database retrieval system
