Salvia miltiorrhiza (redroot sage): 131011931
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Entry
131011931 CDS
T09291
Name
(RefSeq) protein PIR-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131011931
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131011931
Factors involved in mRNA localization
Other mRNA localization factors
131011931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
131011931
NCBI-ProteinID:
XP_057795814
LinkDB
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Position
2:49358271..49373202
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AA seq
1286 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDDQPEIQGPGFWVSTERGATISPIEYSDVSAYRLSLSEDTKA
INQLNLLVREGKEMGSVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASASSKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELNFALLFPERHILLRVLPVLVVLAASSEKDSESLYKRVKINRLVNIFKNDPVI
PAFPDLHLSPAAILKELSTYFPKFSAQTRLLTLPSPHELPPREAQDYQRHFLIINHIGAV
RAEHDDFSIRFASALNQLALLRSMDGADMEFAKEVKGNVYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKEPVSTELHEPSSFSDYEKVVRYNYSADERKAMVELVSYIKGIGSLMQKSD
TLVADALWETVHAEVQDFVQNILATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPDS
EMQAFQHGGEESRGAFFYPRPVAPTAAQIHCLQFLIYEVVSGGNMRKPGGLFGNTGSEIP
VNDLKQLETFFYKLGFFLHILDYTATIANLTDLGFLWFREFYLESSRVIQFPIECSLPWM
LVDHVIESQSAGLLESVLMPFDIYNDASQHALVVLKQRFLYDEIEAEVDNCFDIFIAKLC
DTIFTYYKSWAASELLDPSFLFALDIGEKFSVQPMRFTALLKITRVKLLGRTINLRDLIS
ERLNKICRENIEFLFDRFESQDICAIVELEKLLEVLQLAHELLCKDLTLDSFTLMLSEMQ
ENVSLVSYSSRLATQIWTEMQNDFLPNFILCNTTQRFVRSSRVPPIPVQKPSVPQAKPNF
YCGTQDLNSAYQSFARLHSAFFGIPHMYSIVRLLGSRSLPWLIRALLDHVSNKMTTLEPM
ITGLQEVLPKSIGLLPFDGGVSGCIRVVQEHLNCWQSKSELKLEALRGIKEIGSVLYWMS
LLDIVLREVDTSQFMQTAPWLGITPGVDGQAIQFQDGEDSPIIGLFKSIAVTSVSNPSFP
NSSSFRVLSRQAEAADLLYKSNINAGSVLEYSLAFTSAVLDKYCTKWSVAPKTGFVDITT
SKDFYRIYSGLQMEYLHEAVQVQPGHHGMLGDSVAWGGCTIIYLLGQQLHFELFDFSHQV
LNVAEVEVASITSAHRNSHFLQGFEGLLEAMKKARRLNNHVFSMLKARCPLEDKQACAIR
QSGAPLHRVKFENTVSAFETLPQKGA
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcccagtagaggaagccattgctgcactgtccacattttcattggaggacgat
caaccagaaattcaagggcctggattttgggtgtcaactgagagaggtgcaactattagt
ccaattgaatatagtgatgtttccgcctatcgcttatctttatctgaggacactaaagcc
attaatcagctgaatttgcttgtccgagaaggcaaggaaatgggttcagtgctttataca
taccggagttgtgttaaagcccttccacagcttccagattctatgaagcaaagtcaggct
gacttgtatctggaaacttaccaagttttagacctagagatgagccgtttgcgcgaaatt
cagcgatggcaagcatcagcttcatcgaaactagcagctgatatgcaacgtttctctaga
ccagagcgacgcatcaatggtcctaccataacacatctctggtcgatgctgaagttacta
gatgtgttagtccaacttgatcatctaaaaaatgcaaaggctagcattcctaatgacttc
tcttggtacaaaaggacatttacacaagttagcgtgcagtggcaagatactgattcaatg
agggaagagctagatgacttacagatctttctcagtacaaggtgggcaattttgttgaat
ttgcacgttgagatgttcagggtcaacaatgttgaagacattctccaagttctcatagtt
tttgctgttgagtcactggagttgaatttcgcccttctctttccagagcgccacattctt
ctccgtgttttgcctgttcttgttgtcttggcagcttcatcagaaaaagatagcgagtct
ctgtacaagagagtaaaaatcaacagattggtcaatatatttaagaatgatccagtcatc
cctgcatttccagatcttcatctttctccggctgcgatactaaaagagttgtcaacatac
ttcccaaaattttcggctcaaactcgacttctcactcttccttcaccccatgagctgcca
cctcgcgaagcacaagattatcagcgtcactttttaatcatcaaccacattggggcagtt
cgtgctgaacatgacgacttctccattcgttttgcttctgccttgaatcagcttgctcta
ttaagatcaatggatggtgcagatatggagtttgcaaaggaagtcaaaggaaatgtctat
gatatggttgttgaaggttttcaactcctaagtagatggactgcacgtatttgggaacag
tgtgcatggaaattttcacgaccgtgcaaggagcccgtttccacagagttgcatgagcca
tcatctttttctgactatgagaaggtggtaagatataattatagtgccgacgaaagaaaa
gccatggtagaacttgtgagctatatcaagggaattgggtcattgatgcagaagtctgac
acactagtcgcagatgccttgtgggaaactgttcatgcagaggtccaagattttgtgcaa
aatatacttgccactatgctgcggactaccttccgtaagaagaaggacctttctaggatt
ctttctgatatgcgtacactttcagctgattggatggcaaatacaagcaaacctgattct
gaaatgcaagcattccagcatggaggtgaagaaagtagaggagccttcttttatccaaga
ccagtagcacctacagctgcacagatccattgtttacaattcttgatatacgaggtggta
tcaggtggcaacatgaggaagcctggtggcctttttggcaatactggttctgaaattcct
gtcaatgatttgaagcagttggaaacattcttctacaagcttggatttttcttgcatata
ttagactatacagcaactattgcaaacttgacagatcttggtttcttatggttcagggaa
ttttatttggaatcttctcgggttatccagtttcctattgaatgttcccttccttggatg
ctggtggatcatgtaatagagtctcaaagtgctggtcttcttgagagtgtattgatgccc
tttgacatctataatgatgcttctcagcatgcgcttgtagtcctcaagcaacgattcctt
tatgatgaaattgaagcagaggtggacaattgctttgacatatttatagcaaaattatgc
gacaccatcttcacatactataagagttgggcagcaagtgagctgctggatccatcattc
ttgtttgccttagacattggtgagaagttttcagttcaaccaatgagattcactgcacta
ttaaagattactagagtgaagttgcttggaaggactatcaacttgagagatttgatctct
gaaaggctaaacaaaatatgtcgggagaacattgaatttttgtttgatcgatttgagtct
caggatatatgcgctattgtggaattggaaaagctccttgaagtcttgcaacttgctcat
gaattactttgcaaagatctgactcttgattcatttactctcatgttgagtgagatgcaa
gagaatgtatctcttgtttcttattctagccgacttgcaacacagatttggacagagatg
caaaatgactttttaccaaactttatcctgtgtaatacaactcagcgctttgttagatca
tcaagagtgcctcctattcctgttcaaaaaccatcagttccacaggcaaagccaaacttc
tattgtggtacccaagacctaaattctgcataccagagctttgcccgattacacagtgca
ttttttggcattcctcacatgtactccattgtcagacttctggggtccagatcattacca
tggcttatccgagcactattagatcatgtgtcaaataagatgacaactcttgaaccaatg
atcaccggcttgcaagaggttctacctaagtctataggactgcttccttttgatggtggt
gtatcaggttgtataagggttgttcaggaacatcttaattgctggcagtcgaaatcagaa
ctgaaacttgaggctcttcgtggaataaaggaaataggaagcgtcctgtactggatgagt
ctgcttgatattgttctgagagaagtagacactagccaattcatgcaaactgctccttgg
ctgggtataactcctggtgtggatggacaagcaatacaattccaggatggtgaagatagc
cctatcattggtctatttaaatcgatagcagttacaagtgtttcgaatcctagcttcccg
aattcatcatctttcagagtcctgtcaagacaagcagaagctgctgacctgttatacaag
tcaaacattaatgccggaagtgtgctggaatattcacttgcttttacaagtgcagtatta
gataaatattgtaccaaatggagcgtggcaccgaagacaggatttgtcgatattactact
tccaaggacttctatcgtatatatagtggcctccaaatggaatacctacatgaagctgtt
caggtacaaccaggccatcatggaatgctgggggattcagttgcttggggtggctgcaca
ataatatacttactcggccaacaattgcattttgagctgttcgacttctcacaccaagtc
ctcaacgttgcagaggtcgaggttgcatcaatcacatcagcccataggaattcacacttc
ctccaaggtttcgaaggcctattggaagccatgaagaaagcgagaagactgaataatcat
gttttctcaatgttgaaagcacgctgtccattggaggacaagcaagcttgcgcgatcagg
caaagtggggcgccactgcatcgagtcaagtttgagaatactgtctccgccttcgaaaca
ttgcctcagaaaggtgcctga
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