Salvia miltiorrhiza (redroot sage): 131012919
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Entry
131012919 CDS
T09291
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131012919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
131012919
03029 Mitochondrial biogenesis [BR:
smil03029
]
131012919
Membrane trafficking [BR:
smil04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131012919
Atg1 complex
131012919
Mitochondrial biogenesis [BR:
smil03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131012919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
131012919
NCBI-ProteinID:
XP_057796872
LinkDB
All DBs
Position
2:complement(8321882..8327515)
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AA seq
622 aa
AA seq
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MASYHGNSHSERAKMEQIITEFFAKSLHIILESRCPYVSSRNYSGEQVLSSPSPSSSSSS
SSSVRPRDKWFNLALRDCPAALENIDFWRQSNLEPMIVDVILMQRPIDWDPLNFSPKTGF
GWNSSGKERHYYGSDNEEFGCEGKNERIIERWVLQYESKKNGGGSSGSKKRSNCTSSHAL
YKKSILLLRSLYATVRLLPAYKLFRDLTSSAQIRLYNLGHRVSSFVEPFTRREEADMQRF
VFTPVDTSCGRLCLSVLYRSSVVDMSSDPSTPISPQFIPEYVGSPMAEPLKRFPSGFVSQ
GSPSSSPFGRRHSWSYDLYRASPPSANPSPSPSPTYSDSHASLAKQRCRRLPPPGLPQYL
PDETLIAHMKNPSYDEYWPSPVFSPSPSPSPPTYVPNSHISKALLRCESAPVSIPVTRLS
SMPSLSNKQLLPPSPPMNATILTTAEKIAHAGPHQTTSTADKLFSLRKDKPQKISGVRPS
LNSHPSKSFSSRLPFQDDYNDGPFVVDDDELLDPSSRSGLFELPGHPSRSNRSQDAAVGA
LVRMLKKAPPLHQDTSGTTLDLQGPKLQGATEISEEPRAQQSSASNLVSSSRLALVASKT
TANALEELHGYRKMKDSLLKSK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttatcacggtaactctcattcggaacgtgccaaaatggaacagataatcaca
gagttttttgcgaaaagccttcacataatactcgagtcgcgttgcccttacgtctcttcg
cgtaattacagcggggagcaggttttgtcctcgccgtctccgtcttcttcttcgtcgtcg
tcttcgagtgttaggcctcgggataagtggtttaatctagcgctgagggattgccctgct
gccttagagaacatagatttttggcggcagagtaatcttgagcccatgatagttgatgtt
atacttatgcagaggcccattgattgggatcctttgaatttctcccctaaaacaggcttt
gggtggaattcatcggggaaggagcggcactactatggctcggataatgaggaatttggg
tgtgaagggaaaaatgagaggattattgagagatgggttctgcaatatgagagtaagaag
aatggtggtggctcttctgggagtaagaagaggtcgaattgtacgagctctcatgctttg
tacaagaagtcgatactgttgttgaggtcactgtatgcgacagttaggcttttgcctgct
tataagttgttccgtgatctcacttcatctgctcaaattcggctgtataatcttggccat
cgagtctcatcttttgttgagccgttcacccgtagagaagaggcagatatgcagcgattt
gtgtttactccggttgacacttcctgtggcaggctctgcctttcggtcctgtatcgatca
tcagtagtggatatgagttcggatccttcaactcctatatcaccgcagttcattccagag
tatgttgggagtcccatggcagaaccactgaaaaggtttccttctggtttcgtatctcaa
ggctccccttcttcgtctccatttggaaggcggcatagttggagttatgacttgtataga
gcatcaccaccttcagctaacccctcaccttcaccttcgcccacatactccgattctcat
gcctcattagcaaaacagcgctgtcgtcgtcttcctcctccaggcttgcctcagtattta
cctgatgagacacttattgctcatatgaaaaatccaagttatgacgagtattggccttcc
cctgtgttttcaccatctccatctccatcaccacccacctatgttcccaatagtcatata
tccaaagctcttttacgatgtgaaagtgctcctgttagtatacctgtgactagactttct
agcatgccttcactgtcaaacaaacaactgctgcccccttcacctcccatgaatgctact
atactaaccactgctgagaaaattgcacatgcggggcctcaccagacaacctcaacagct
gataagttattctcattgcgcaaggataagccgcagaagatatctggggtgagaccatca
ttgaatagccacccatcaaaatcattttctagtaggttaccatttcaggatgattacaat
gatggaccatttgttgtggatgacgacgaattactagatccaagttccaggtcaggtttg
tttgagctgccaggacatccatcccggtcaaatagatcacaagatgctgctgtcggtgct
cttgttcgtatgctgaagaaagcaccacctcttcaccaggatacttctggtaccacacta
gatctgcaaggccccaagcttcaaggcgctactgaaatatccgaagagccaagagcccag
cagtcttctgcttcgaatcttgtgtcgtcgtctaggcttgcgctcgtcgcatccaagact
acagcgaatgctctggaggagctccatggctacagaaaaatgaaagattcattgcttaaa
tcaaagtaa
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