Salvia miltiorrhiza (redroot sage): 131012987
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Entry
131012987 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131012987
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
131012987
Enzymes [BR:
smil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
131012987
Transfer RNA biogenesis [BR:
smil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131012987
Prokaryotic type
131012987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
131012987
NCBI-ProteinID:
XP_057796963
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Position
2:complement(64700080..64702455)
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AA seq
602 aa
AA seq
DB search
MAENSPPPPSSPPSLEELPDPKRQKMSTTITSDEENPQNAAAIPRTPKYKRRKVAIFFAY
CGVGYQGMQKNPGAKTIEGDFEEALFLAGAIPEDERGMHRRFDWARSARTDKGVSAVGQV
VSGRFFVDPPGFVERLNSHLSPQIRVFGYKRATPSFNAKKFCDRRRYVYLIPVFALDPSC
HRDRESVLASVGSGNELVKCVECSERGRKVFGVMGKRSFESKDAAESVGIGSGISSNNGR
SVVENESGTHDSEQNSSITNENVEAPETEVLEPVNEVSVDEIAEKGNDNGGSGNGSSESK
KVLESGVGDVETSKEDKLECEDASSPAKIEQKSEFCYGEGEKERFNRILKYYEGTHNFHN
FTTRTKAEDPAAKRYILSFNAKTVLNIDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRN
LSPESLIEKAFEQKVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMKSYAEEAEDF
KMKYIYSHIAATEYKDGAVAVWLHSLNYRNYPDLRGADTTPIPDGNKVVDNCPSSEVTPI
ADGNEVVENFQSSEEVAPIPDGDKVVDNCPSSEVTPIPHGNKVVDNCPSLEVENKDKMNV
DE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaactcaccacctccgccgtcgtcgccgccttcactagaagaactacccgat
cccaaaaggcagaaaatgtcaaccaccatcacctccgacgaagaaaatccacaaaacgcc
gccgcaattcccagaacccccaagtacaagcgccgcaaagtcgcgatattcttcgcctac
tgcggcgtcggctaccagggaatgcagaaaaatcccggcgccaagaccatcgagggcgat
ttcgaggaagccctctttttagcgggagcaattccggaggatgagcggggaatgcacaga
cggttcgattgggcccggtcggctcggaccgataagggcgtcagcgccgtggggcaagtc
gtgtcgggcagattcttcgtcgatccgcccggtttcgtggagcggttgaactcccaccta
tcaccgcagattcgggtgttcgggtacaagcgggcgacgccgtcgtttaatgcaaagaag
ttctgcgatcggcggaggtacgtatacttgatccctgttttcgcgctcgatccgtcgtgt
catcgtgatagggagagtgttctagctagcgtgggatcggggaatgagcttgttaagtgt
gtcgagtgttcggagagagggaggaaggtttttggtgtgatgggaaagcgtagctttgag
tcgaaagatgcggctgaaagtgttgggattggttctggcatttcgtcgaacaatgggcgt
tccgtagtggaaaatgaatctggaactcatgattctgagcagaactctagtattacaaat
gagaatgttgaagctccagaaactgaggtattggagccggttaatgaagtttctgtggat
gagattgcagaaaaagggaatgataacggtggaagtggcaatggaagtagtgaaagcaag
aaggttttggaaagtggagttggggatgttgagacgtccaaggaagataaattggaatgt
gaggatgctagcagccctgcaaaaatcgagcaaaagagcgagttctgctatggggagggc
gagaaggaaaggtttaatcgaattctcaagtattatgaagggacacataactttcataat
ttcactacaagaactaaagccgaggatcctgctgctaagcgatacattttgtcatttaat
gcaaaaactgtgctcaacattgatggaatggattttataaagtgtgaggttgtggggcaa
agctttatgcttcatcaaatacggaagatgatcggtcttgctgttgcaatcatgaggaac
ttgagtcctgagtcgttgatagagaaagctttcgagcagaaggtaaacattaatgtgccc
atggcgcctgaagttggactgtatttagatgagtgcttcttctcatcatacaatcagaaa
tggaaagacagccatgaggagctgtccatgaaatcttatgctgaggaagctgaggacttc
aaaatgaagtacatttactctcacattgccgcaacagagtacaaggatggagctgttgct
gtctggctgcattctttgaactaccgcaactatccagatctacgcggagcagacaccact
cctattcctgatggaaataaggtggtggataattgcccaagctcggaggtaactcccatt
gctgatggaaatgaggtggtagaaaatttccaaagctcggaggaggtcgctcctattcct
gatggagataaggtggtcgataattgcccaagctcggaggtgactcctatccctcatgga
aataaggtggtcgataattgcccaagtttggaggtggagaacaaggacaaaatgaatgtg
gacgagtga
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