Salvia miltiorrhiza (redroot sage): 131013105
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Entry
131013105 CDS
T09291
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131013105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131013105
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131013105
mRNA degradation factors
5'-3' decay
Lsm complex
131013105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
131013105
NCBI-ProteinID:
XP_057797100
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All DBs
Position
2:complement(65875157..65878437)
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AA seq
132 aa
AA seq
DB search
MSSSMSWAEPADVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERLI
VGDLYCDIPLGLYVIRGENVVLIGELDPLKRELPPNMVRVSEPEIRSAQKVEREASELMG
TMKKRMDFLDMD
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcaatgtcttgggcggaaccagcggatgtttatctctctacttctcttgcc
agttatcttgacaagaaacttcttgtgttacttcgagatggacggaaacttttagggatt
cttcgttcgtttgatcagtttgctaatgttgtcctagaaggtgcatgtgagcgtcttatt
gttggtgatctatattgtgacattccattaggtctatatgtaatccgtggggaaaatgtt
gtcttgattggggagctggacccgctgaagagggaactacccccaaatatggttcgtgtt
tcagaaccagagataagaagtgcacaaaaagtggagagggaggcttcagagctcatgggt
acgatgaaaaagaggatggatttccttgatatggattga
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