KEGG   Salvia miltiorrhiza (redroot sage): 131013105
Entry
131013105         CDS       T09291                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131013105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smil03019]
    131013105
Messenger RNA biogenesis [BR:smil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131013105
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     131013105
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 131013105
NCBI-ProteinID: XP_057797100
LinkDB
Position
2:complement(65875157..65878437)
AA seq 132 aa
MSSSMSWAEPADVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERLI
VGDLYCDIPLGLYVIRGENVVLIGELDPLKRELPPNMVRVSEPEIRSAQKVEREASELMG
TMKKRMDFLDMD
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagttcatcaatgtcttgggcggaaccagcggatgtttatctctctacttctcttgcc
agttatcttgacaagaaacttcttgtgttacttcgagatggacggaaacttttagggatt
cttcgttcgtttgatcagtttgctaatgttgtcctagaaggtgcatgtgagcgtcttatt
gttggtgatctatattgtgacattccattaggtctatatgtaatccgtggggaaaatgtt
gtcttgattggggagctggacccgctgaagagggaactacccccaaatatggttcgtgtt
tcagaaccagagataagaagtgcacaaaaagtggagagggaggcttcagagctcatgggt
acgatgaaaaagaggatggatttccttgatatggattga

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