Salvia miltiorrhiza (redroot sage): 131013160
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Entry
131013160 CDS
T09291
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
smil03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131013160
03083 Polycomb repressive complex
131013160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
131013160
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131013160
Histone modification proteins
HAT complexes
HATB complex
131013160
HDAC complexes
Sin3A-HDAC complex
131013160
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131013160
PRC2.2
131013160
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131013160
Heterochromatin formation proteins
Other heterochromatin formation proteins
131013160
Chromatin remodeling factors
NuRD complex
131013160
NuRF complex
131013160
NuRF complex (fruit fly)
131013160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
eIF2A
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
131013160
NCBI-ProteinID:
XP_057797184
LinkDB
All DBs
Position
2:66439974..66447126
Genome browser
AA seq
460 aa
AA seq
DB search
MKERAAERTVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQIEQATYKNRQRLYLS
EQTDGSVPNTLVIANVEVVKARVAAAEHIAQFNEESRSPFVKKSKTIIHPGEVNRIRELP
QNSNIVATHTDSPDVLIWDVESQPNRQPVLGATPSRPDLILTGHQDNAEFALAMCPTEPF
VLSGGKDKSVVLWSIHDHISSLAADQGAHKSPGSKSNLSNGKAGDGTTVEARGIFQGHED
TVEDVQFNPSSAQEFCSVGDDSCLILWDARTGTSPVVKVEKAHNADLHCVDWNPNDVNLI
LTGSADNTVRMYDRRNLTSEGVGAPVHIFEGHSAAVLCVQWSPAKASVFGSAAEDGILNI
WDHAKIGKAGDHAGAGDSNYPPGLFFKHAGHRDKVVDFHWNAADPWTIVSVSEDGEKTGG
GGTLQIWRMIDLIYRPEEEVIAELDKFKSHLLTCSTSSNS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagagccgcggagcgtacggttgaggagcgctacacgcagtggaagtcgctc
gtaccagttctctacgactggctggcaaatcacaatctcgtttggccgtccctctcttgc
cgttggggacctcaaatagagcaagcaacatacaagaatcgtcaaaggctatacctttcc
gaacagacagatgggagcgttccaaatacacttgtcatagcaaatgttgaagttgtaaaa
gctagggttgcagcagcagagcacatagcacagttcaatgaagaatcacgatcacctttt
gtgaagaagagcaagaccatcattcatcctggcgaggtgaaccgaatcagggaactgcca
cagaacagcaacattgtggcaactcacaccgacagtcccgatgttctcatttgggatgtg
gaaagtcagcctaatcgtcaacctgttttaggtgccacgccatcacgccctgatttgata
ctgactggacatcaagataatgctgaatttgcactagccatgtgtcctacagaaccattt
gtgctctctggaggcaaggacaagtcagtggtgttgtggagcatccacgaccatatatcg
tctttggctgcagatcagggagctcataagtctccaggttctaagagtaatttatccaat
ggtaaagctggtgatggaacaactgttgaagcacgggggatattccaggggcatgaggac
actgtcgaagatgtccagtttaacccatcaagcgcacaggagttctgcagtgtaggtgat
gattcttgcctgattctgtgggatgcaagaactggcacttctcctgtcgttaaggttgaa
aaggctcacaatgctgaccttcattgtgttgattggaatcccaatgacgtgaatctgatt
ttgacaggatctgctgataatactgttcgcatgtatgatcgtcgaaatcttacttccgag
ggagtgggagcccctgttcatatttttgaaggccattctgctgctgttctctgtgtccag
tggtctccggcaaaagcatctgtgttcggcagcgctgcagaggatggtatcttaaatata
tgggatcatgcaaagattggaaaggcaggggatcatgctggagcgggagattcaaattac
ccccctggcttattttttaaacatgctggccacagggacaaggtggtcgattttcactgg
aatgcagcagatccctggactattgttagcgtgtctgaggatggtgaaaagaccggtggc
ggaggtacactgcagatttggcgaatgatcgacctaatttatcggccagaagaagaggtg
atagctgagctggataagttcaagtctcatcttttgacgtgctccacttcatccaattct
tga
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