Salvia miltiorrhiza (redroot sage): 131013302
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Entry
131013302 CDS
T09291
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4-like isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03022
Basal transcription factors
smil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131013302
09124 Replication and repair
03420 Nucleotide excision repair
131013302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131013302
03400 DNA repair and recombination proteins [BR:
smil03400
]
131013302
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131013302
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131013302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
131013302
NCBI-ProteinID:
XP_057797356
LinkDB
All DBs
Position
2:30772367..30780224
Genome browser
AA seq
330 aa
AA seq
DB search
MILSNFLKLVIDFKIVFLKLHSFIKFQITEGKMTPVSSKLYAGPLFFYDVSLLMVLIDTN
PFFWNSAQSTLPFSKFLTHVLAFLNSILLLNQMNQVVVIAAGYNSCGYIFDSSDPQSQNQ
RAEDLLDKLEEFVDNDQELCREQSVDGPGFSLLSGSLSMALCYIQRVFRTVPLHPQPRIL
CLHGSPDGPGQYVAIMNSIFSAQRSMVPIDACVIGAQHSAFLQQASYITGGVYLKPQILD
GLFQYLSTVFATDLHSRCFLQLPKPTGVDFRASCFCHKNTIDMGYICSVCLSIFCKHQKK
CSTCGSVFGQAQTQDSSTTPDRKRKTLVDG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatattatcaaactttctcaagcttgtgattgatttcaagattgttttcttgaagcta
cattccttcattaaatttcagataacagaggggaagatgacccctgtctcatccaagctt
tatgcaggtcctcttttcttctatgatgtgagtctgttgatggtactaattgacacgaat
ccattcttttggaactcggctcaatccacgcttcctttctccaagttcttgacccatgta
cttgcatttttgaattctatacttttgctgaatcagatgaaccaagtggttgtcattgca
gctggttataattcgtgtggctacatatttgattcctcagacccacagagccaaaatcaa
cgggcagaggatttactggataaattggaggaatttgtggacaatgaccaggaactatgt
cgtgaacagtctgtggatggccctgggttctcacttttatctggttccctctcgatggcc
ctttgctatattcagagggtcttccgtacagtgccgcttcatccccagcctcggatatta
tgcttgcatggatctccagatggacctggacaatatgtagcaatcatgaattcaattttt
tctgctcagcgatcaatggttcctatagatgcatgcgtgataggagctcaacactctgct
ttcctacagcaggcttcttatataactggtggtgtatatctgaagccgcagatattggat
ggtttgtttcagtatctttcgacagtgtttgctactgatttgcattctcgttgcttttta
caacttcctaagcctacaggagtagactttcgtgcgtcgtgtttctgccacaaaaacaca
attgatatgggctacatttgctctgtttgtttatctatattctgcaagcatcagaagaaa
tgttctacctgtggatcagtgtttggtcaggcccaaacacaggactcctcgacaacaccg
gaccggaagaggaagacactggtggatggttag
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integrated database retrieval system
