Salvia miltiorrhiza (redroot sage): 131014312
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Entry
131014312 CDS
T09291
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131014312
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131014312
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
131014312
NCBI-ProteinID:
XP_057798229
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Position
3:52555801..52557613
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AA seq
417 aa
AA seq
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MAKIFALSIFLTALLLANATRSENGSEPKHENNAVDDPEAVAAMVHMSIQNRSESRKLES
VTCGTGNPIDDCWRCDPNWIRNRRRLADCAIGFGRSSVGGRDGRYYVVTDPSDEDAVNPR
PGTLRHAVIQDRPLWIVFKRDMVITLKQELLVNSFKTIDGRGANVHIANGACITIQHVTN
VIVHGLSIHDCKPTGNALVRSSPSHSGWRGMADGDGISIFASSHVWIDHNSLASCSDGLI
DAIMGSTAITISNNYFSHHNEVMLLGHSDDYEGDKVMQVTVAYNHFGEGLTQRMPRCRHG
YFHVVNNDYTSWEMYAIGGSANPTINSQGNRFLASNNPFAKEVTKRVVNTTDGESWRKWN
WKSEGDRLLNGAYFTASGQGTASSYARASSLAAKPSSLVATLTSDAGVLHCRKAVRC
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaatatttgctctctccatatttctcactgcactgctgctcgccaatgcaaca
agatcagaaaatggaagtgagcccaagcacgaaaacaacgcagtggatgatccggaggct
gtagctgccatggttcatatgagtatccaaaatagaagcgagtcaaggaagcttgaatcc
gtcacgtgcgggacggggaaccccatcgacgactgctggcggtgcgacccgaactggatc
cgcaaccgccgacgcctggccgactgcgccatcggcttcggccgcagctccgtgggcggg
cgggacgggcggtactacgtggtgacggaccctagcgacgaggacgccgtgaacccccgg
ccgggcaccctccggcacgccgtgatccaggaccggccactctggatcgtgttcaagcgc
gacatggtgatcacgctgaagcaggagctgctggtgaacagcttcaagaccatcgacggc
cgcggcgccaacgtccacatcgccaacggcgcctgcatcaccatccagcacgtcaccaac
gtgatcgtccacggcctcagcatccacgactgcaagcccaccggcaacgccctggtccgg
agctcgccctcccactccggctggcggggcatggccgacggcgacgggatatccatattc
gcatccagccacgtgtggatcgaccataactcgctggccagctgctccgacggactcatc
gatgctatcatgggatcgaccgccattactatctccaacaattacttctctcaccacaac
gaggtcatgctgttgggacacagcgatgactacgagggagacaaggtgatgcaggtgact
gtggcgtacaatcattttggggaggggctaacgcaaaggatgccgaggtgcaggcatggg
tatttccatgtggtgaacaacgactacacttcgtgggagatgtatgctattggtgggagc
gcaaatcccaccatcaacagccagggcaacagatttcttgcctccaacaacccttttgct
aaagaggtaacgaagagggtagtaaatacaacggatggtgagtcgtggaggaagtggaac
tggaaatcggagggcgatcggctgctaaacggcgcgtatttcacggcgtcggggcagggt
acagcaagcagctacgctagggcgtcaagcctggcagcgaagccttcttccttggtagca
acactcaccagtgatgctggggtgctacactgccgcaaagccgtccgctgctga
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