Salvia miltiorrhiza (redroot sage): 131014403
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Entry
131014403 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131014403
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131014403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131014403
03019 Messenger RNA biogenesis [BR:
smil03019
]
131014403
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131014403
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131014403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Sde182_NH-like
Motif
Other DBs
NCBI-GeneID:
131014403
NCBI-ProteinID:
XP_057798342
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All DBs
Position
3:complement(53734229..53738408)
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AA seq
518 aa
AA seq
DB search
MLPHFNSHLHNPNNQLQLNGANASAPHQVMGSQGNLGQINPQFRPGVLNNAQLPMPPFTN
PNPFFAPNQFFPFPQGAFHNLNANNLPQPFAQNAINPAQFLPNWQLNMPNLVQNVTQLLQ
MQMMNAAPQDLGLFMNAQSGAGSNNGVLPLPVDGNSLTRMNHNNAVTKDIGVHHAQRNWD
IFSPGAANPQSDAGVVNDVNDRKNTWRKPHDKNFTGNHKHNESQRGFGNKQFHTRQNAQG
NFKFNNENRGKGNKKFVGKNFNLSSPSEQIQVGKKRSLMLNYTEQEIQHWREERKKNYPS
QTNMEKKLKKNPKQPEVTDEAAKIRRQQLKEILAKQAELGCEVAEIPSCYLSDPEQQTDG
NKQNNKAFGKRDRFHNKFDKKGRFQHSDRFSKKQRYENGHSASLQNQTTNPHRENKKEPS
LLKKLLSSEIKKEKKHLLQVFRFMVVNNFFENWPEKPLEFPKVIVKESGDESEIVKQKPY
VIKGDTSSALATLENGLDKDDDVCTAKYPNGEDVGERP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctcacttcaattctcacctccacaaccctaacaatcaacttcaactcaatgga
gctaatgcttcagctccacatcaggttatggggagccaaggcaatttagggcaaataaac
cctcagtttcgaccgggagtgctcaataatgctcagctgccaatgccaccctttacgaac
ccaaatcccttttttgctccaaaccaatttttcccctttccacaaggcgctttccacaac
ctaaatgctaacaatttgcctcagcctttcgctcagaatgccataaaccctgctcagttc
ttgcctaattggcaactgaatatgcctaatttagtgcaaaatgtcacccagcttctgcaa
atgcaaatgatgaatgctgcccctcaagatttgggtctttttatgaatgcacaatcgggt
gcaggaagtaacaacggggtcttgccactgcctgttgatggaaacagtttaacgcgtatg
aaccataataacgctgtaaccaaagatatcggtgttcatcatgcacaacgaaattgggat
atcttttctcctggtgctgcaaacccgcagagcgatgctggagtagttaatgatgtgaat
gacagaaagaatacttggcgaaaacctcatgacaagaacttcactgggaaccataaacat
aatgaatcacagagaggatttggcaacaagcaatttcatactcgccaaaatgcacaggga
aacttcaagtttaataatgaaaatcgaggaaaagggaacaaaaaatttgtagggaagaac
tttaacttatccagcccttctgagcaaattcaagtgggaaaaaagaggtctctcatgtta
aattatacagaacaagaaattcaacattggcgtgaagaacgcaagaaaaactacccatca
caaaccaacatggagaagaagttgaaaaagaatccaaaacagcccgaggtcacagatgaa
gccgcaaagataagacggcagcaactcaaggaaatattggcaaaacaagctgaattaggt
tgtgaagtagcagaaataccatcttgttacctatctgatcctgagcaacagacagatggt
aacaaacaaaataataaggcatttggaaagagggacagatttcataacaagtttgataag
aagggcagattccagcatagtgaccgcttctctaagaaacaaagatatgaaaatggtcat
tctgctagcttgcaaaaccaaacgaccaacccgcatagagagaataaaaaggagccatct
ctgttgaagaaactactaagttctgagatcaagaaagagaagaaacatctcctgcaggtt
ttcaggttcatggtagtgaataacttctttgagaattggcctgaaaaacctctggaattc
cctaaagttattgtcaaagaatctggtgatgaaagtgagattgtaaaacagaaaccctac
gtgattaaaggtgatacttctagtgcccttgctactctagaaaatggtctagataaagat
gatgatgtttgtactgcaaaatatccaaatggtgaagatgtaggtgaaagaccttaa
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