KEGG   Salvia miltiorrhiza (redroot sage): 131014462
Entry
131014462         CDS       T09291                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131014462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smil03041]
    131014462
Spliceosome [BR:smil03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131014462
 Complex B
    131014462
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 131014462
NCBI-ProteinID: XP_057798425
LinkDB
Position
3:54404167..54411441
AA seq 580 aa
MATHEADKNSLSPSRIESLEPAAMQEKAHKGSSSSGSKHESREHARDRERESSKSRDRER
ERGRDKDRDRDKEKDKERERVRDRDRERDKDRDKDRERERDKDRDRHHRDRHRDRSERRE
RTRDRDDRDDYYRSRDYDMRKDYDKDREERHRHRSRSRSRAKSEHRSRSRSRSRSKSKRM
SGFDMAPPAALLPNTAAAVAGQLPGAPPTLPGMFPNMLSLPGGQFGALPGMPVQAMTQQA
TRHARRVYVGGLPPTANEQTVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMR
SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG
LEGPDRIFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD
IACAALNGIKMGDKTLTVRRANQGATQPKPEQESVLMHAQQQIALQRLMLAPTIAPATKV
VCLTNVVTLDELMDDDDYEDILEDMRTECGKFGTLVNLVIPRPVPVEENAPGVGKVYLEY
ADTESAVKARQGLNGRKFGGNEVVAVFYPENKFSEGDYSA
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggcaactcacgaggctgataaaaattccctttctccatctcgtatagaatcactcgaa
ccagcagccatgcaggagaaagctcacaaaggttcctcaagttctggatccaagcatgaa
tctcgggaacatgcaagagatagggagagggagtcctctaaaagcagagacagggagagg
gaaagaggtcgagacaaagatagagacagggacaaagagaaggataaggagcgagaaagg
gtgagggacagagatagggaaagggataaggacagggataaagacagggaaagagaacgg
gacaaagatcgtgatcggcatcaccgagatcgccacagagacagaagtgagagaagggaa
aggaccagagatagggatgatcgtgatgactactaccgaagccgagactatgacatgcgg
aaagattatgataaagatagggaggaaagacacaggcacagatcaagatctcgttctagg
gctaaatctgagcacagatcaaggtcacggtctcgttcacgttccaaaagcaaaaggatg
agtggttttgacatggctcctcctgctgcattgcttccaaatactgccgctgctgttgca
ggtcagcttccgggagcaccccccacccttcctggaatgttccccaacatgttatctttg
ccaggcggacagtttggagccctccctgggatgcctgtgcaggcaatgactcagcaggct
accagacatgctcgcagggtctatgttggtggccttccaccaactgctaatgaacagact
gtggcaacattctttagtcatgttatgtcagcaatcggaggaaatactgccggtccagga
gatgccgtagtgaatgtttacattaaccatgagaagaaattcgcttttgtggagatgaga
tcagttgaagaggctagcaatgcaatggctttagatggcattatttttgagggtgcacca
gttaaagtgagaagaccgagtgactataacccctcgcttgctgccactcttggccccagt
caacctaatcccaatctgaatcttgccgctgttgggttgacaccaggatctgctgggggc
cttgagggtccggaccgcatatttgttggtgggttgccgtattatttcacagaatcgcag
atcagggagttgctcgaatcctttggaccacttcggggttttgatctggttaaagataga
gaaacagggaactccaaaggctatgcattttgtgtttaccaggatttatcagttacagat
attgcttgtgcagctcttaatgggataaagatgggtgataaaacgctcactgtcaggcgt
gctaatcagggtgcaacacaacctaaacccgagcaggagagcgtgttaatgcatgcgcaa
caacaaattgcattacagagactcatgctagctcctactattgcaccagcgacaaaggtc
gtttgcttaacaaatgtggttaccctggatgagctcatggatgacgatgattacgaagat
atacttgaagacatgagaactgaatgtgggaagtttggtacattggtgaatttggtaatc
ccccgcccagttcccgttgaagaaaatgcaccaggtgtagggaaggtctatttggaatat
gcggacactgagagtgctgtaaaagctcggcaaggactgaatggaaggaaatttggggga
aatgaagttgtggcagttttctacccagaaaataagttttccgaaggagattacagcgca
tag

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