KEGG   Salvia miltiorrhiza (redroot sage): 131014542
Entry
131014542         CDS       T09291                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03020  RNA polymerase
smil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131014542
  09124 Replication and repair
   03420 Nucleotide excision repair
    131014542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smil03021]
    131014542
   03400 DNA repair and recombination proteins [BR:smil03400]
    131014542
Transcription machinery [BR:smil03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     131014542
  RNA polymerase III system
   RNA polymerase III
     131014542
  RNA polymerase I system
   RNA polymerase I
     131014542
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131014542
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 131014542
NCBI-ProteinID: XP_057798531
LinkDB
Position
1:complement(38791046..38794074)
AA seq 206 aa
MVMSEEEITRLFRTMKTLLHMLRDRGYVVTDDEIGMTKAEFIDKYGHNMKREDLMLIKVM
RNNSAHQIYVFFPDEAKVGAATVRTLVNRMVQDNVTRAILVAQQKLTSFAQNAIHEVFSK
LHLEVFQEAELLVNINQHVLVPTHQVLTPEEKKTLLERYTVKDTQLPRIQMSDPIARYHG
LKRGDVVKIIRPSETAGRYVTYRFVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggtgatgtccgaggaggagatcactcggttgttcagaaccatgaaaacgctgctgcac
atgttgagggacaggggttatgtggtgactgatgatgagattggaatgaccaaggctgaa
tttattgataagtatggtcacaatatgaagagagaggaccttatgcttatcaaagtcatg
cgtaataacagcgcacatcagatatatgtgttctttcctgatgaggccaaggttggagct
gcgacagtaaggactttagtcaatcgaatggttcaggacaatgttactagggcaatccta
gttgcacagcagaaattaacttcttttgcccaaaacgccatacatgaagtattctcaaaa
cttcacttagaagttttccaggaggctgagttgctagtcaacataaaccaacacgtactt
gtccccacgcatcaagtcctcacgcctgaagaaaagaaaactctgcttgaaagatacaca
gtcaaagatactcagctgcctcgtattcagatgtccgacccgattgccagatatcacggg
ctgaaacgtggggatgttgtgaagatcatccgcccaagtgagactgccggaagatacgtc
acttacagatttgtcgtttga

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