Salvia miltiorrhiza (redroot sage): 131014544
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Entry
131014544 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131014544 isoform X1
KO
K12589
exosome complex component RRP42
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131014544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131014544
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131014544
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
131014544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
131014544
NCBI-ProteinID:
XP_057798528
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All DBs
Position
3:complement(55602331..55606494)
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AA seq
291 aa
AA seq
DB search
MVGLSLGEQTFIKGGIAQDLRTDGRKRLTYRPIFVETGIIPQASGSARVKLGATDVIASV
KAELGKPNPSYPDKGKVSIYVDCSPTAEPSFEGRGGEELSTELSSALQRCLLGGKSGAGA
GIDLSSLCIVRGKVCWDLYIDGLVVSSDGNVLDALGAAIKAALSDTAIPKVQVSANAPSD
EQPEVDVSDEEFVQFDTSGVPVIVTLTKAKHSYFLHLRLSQCWGLYSETQRYMLTFAGRG
ALYCRCNYRRGVPDEFSCVCLDQQARPDMWADEERGRRPRSNRYTRHDIGG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctttctctaggggagcaaacatttataaaaggtggaattgctcaggatcta
cgtactgatggtaggaaaagattaacctaccgacccatttttgttgaaactggtatcatt
cctcaggcaagtggctcagccagagtgaagctgggggcaacagatgttattgcaagtgtg
aaggctgaacttggaaagccaaacccatcttatcccgacaaaggaaaagtttccatatat
gttgactgtagtccgaccgctgaaccatcttttgagggcagagggggtgaggaattatcc
acggagctctcttcagcacttcaaaggtgtttgttgggtggtaaaagtggtgcaggcgct
ggaattgatctctcttctctgtgcattgttcgagggaaggtctgttgggatctctacatt
gatggtctagttgttagttcagatggtaatgtgctggatgctttgggagctgccattaag
gctgctctaagcgatacagctattccaaaagttcaagtttctgccaacgctccttctgat
gagcagccggaggttgatgtgagcgatgaggagtttgtacaatttgatacgtcaggggtc
cctgttatagtaactttaaccaaggcaaaacattcatattttctccatcttcgtctttct
caatgttggggtttgtattctgagacacagcgatacatgttgacttttgcaggtcggggg
gcattatattgtagatgcaactacagaagaggagtcccagatgagttcagctgtgtctgt
ctcgatcagcaggctaggccggatatgtgggctgacgaagagagggggcgccggcctcga
tccaaccgttatactcgacatgatatcggcggctaa
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