Salvia miltiorrhiza (redroot sage): 131014547
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Entry
131014547 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 28-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131014547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smil02000
]
131014547
Transporters [BR:
smil02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
131014547
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_16
AAA_5
AAA_30
AAA_29
RsgA_GTPase
AAA_25
AAA_28
AAA_33
Rad17
AAA_15
Motif
Other DBs
NCBI-GeneID:
131014547
NCBI-ProteinID:
XP_057798534
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Position
3:complement(55655627..55661892)
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AA seq
722 aa
AA seq
DB search
MAAAAATPLAPSFNLYSPKHLIKFKTSRLKLKLSNNLNRQSVSCLPASFSRPVSVKGSRA
LAASSIIRRAYVSGPAFDAIVSEVDPKIDGTYIVELQPLDVISWGLLWKLVSRHKWRALA
SVLTLFGCTSCTLAMPLYSGKFFEVLIGARPEPIWQLLSKVGILYTLEPIFTIIFVVNMN
GIWEKVMSSLRAQIFQRVLIQKVEFFDKYKVGELTSLLTSDLGSLKTIVSDNISRDRGFR
AISEVIGTLCLLFALSPQLAPVLGLLMLTVSAVVAVYKRTTVSVFKVHGSALATIADCVT
ETFAAIRTVRSFGGEKRQMSVFGRQVLDYERSGMTLGVFKSINESITRVAVYVSLMALYC
LGGSKVKAGKLAVGTMVSFIGYTFTLTFAVQGVVNTFGDLRGALAAVERINSVLSGAEID
EALAYALEKDLKRRKSHDPNLEPLLANSNGKMQTSSVGYMSSLKSASDVRKLAESGDIHL
EDVSFSYPLRPDVEILQGLDLTLKCGTVTALVGPSGAGKSTVVQLLARFYEPTRGRITVA
GEDLRSFDKSEWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVSKDDVIKAAKAANAHEF
IISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTVSERLVQDA
LTRLMKGRTTLVIAHRLSTVQNADLIALCSDGKISELGTHSELLEQKGLYASLVGSQRLA
FE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctgcagcaacgcctcttgcaccttccttcaacctctattcccccaaacac
ttgattaaattcaaaacttcaagattgaagctcaagctcagcaacaatctaaacaggcag
tctgtttcttgcttgcccgcttcgttttctcggccagtatctgttaaaggatcaagagct
ttagcagcatcaagtatcatcagacgggcctatgtttcgggcccggctttcgacgcaatc
gtgtcggaggttgaccccaaaatcgacggcacctatattgtggagctgcagccgcttgat
gtaattagttgggggctgttgtggaaacttgtttcgcggcataaatggagagccttggcg
tcagttctcacccttttcggctgtacgagttgtacactggccatgcccttgtactctggg
aaatttttcgaagtattgattggggcaagaccagaacctatctggcagctgctgagtaaa
gtgggaatactgtatacattggaacccattttcacaattatttttgtggtaaacatgaat
ggcatatgggagaaagttatgtcgagcttaagagctcaaatttttcagagggtgttgatt
cagaaggtggagttttttgacaagtacaaggttggcgaactgacttccttattaacatcg
gatttgggttctctgaagaccattgttagtgataacatatcaagagaccgtggtttcagg
gcaatttctgaggtcattggaacactttgcttactttttgctctttccccccagctggcg
ccagttttaggcctacttatgctaacagtgtctgcagtagttgctgtatataagagaaca
accgtcagtgtctttaaagttcatggatctgcactagccactatagctgattgtgttact
gaaacttttgctgctatacgtactgtcagatcattcgggggtgaaaaacgtcaaatgtca
gtttttggtcggcaggttcttgactatgagagaagtggcatgaccctcggagtatttaag
tccataaatgaatccatcacaagggttgccgtctatgtctctttaatggctttgtattgt
cttggaggaagcaaagtaaaagctggcaaacttgcagttggaaccatggtttcttttatt
ggatacacttttacattaacatttgccgttcaaggtgtggtgaacacatttggggatctt
cgaggagccttggctgctgttgaaagaattaactcggtcctgtctggtgctgaaattgat
gaagcactagcttatgctctagaaaaagacttgaagagaaggaaatcacatgatccaaac
ctcgaacctctattggccaattccaacgggaaaatgcaaaccagcagtgtgggatacatg
tcgtcactaaaatctgctagtgatgtgcgcaagcttgcagagtccggtgatattcacctt
gaagatgtttctttctcataccctctaaggcccgacgtggaaatcttacaaggccttgat
ctgactttaaaatgtggaacggtcactgctctggttggtcctagtggtgccgggaaaagt
acagtcgtacagcttttagctcgcttttatgagccaacaagaggtcgcataactgttgct
ggagaggatctgcgatcatttgataagagtgaatgggctcgtgcggtttccatagtgaac
caagaacctgttctattctccgtgtctgttggagaaaatattgcttatgggctcccagat
gacaacgtttccaaggacgatgtaataaaagctgctaaagcagctaatgctcatgagttc
ataatctcattgccacagggttatgacacattggtcggtgagcgtggagggttgttaagt
ggaggacagaggcagagaattgccatagcaagggctctgctaaagaatgctccgatcttg
attcttgatgaggctacgagtgctttggatactgtgagtgaacgtctggttcaggatgct
ttgactcgtctgatgaagggaagaacgactttagtgattgctcacagactcagcacggtt
cagaatgctgatcttattgctctgtgctccgatgggaagatttcagaactcgggacacac
tcagagttgttagaacagaagggcttatatgcttctctcgttggctcccaaagacttgca
ttcgagtga
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