Salvia miltiorrhiza (redroot sage): 131014997
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Entry
131014997 CDS
T09291
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smil01001
]
131014997
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131014997
Enzymes [BR:
smil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
131014997
Protein kinases [BR:
smil01001
]
Serine/threonine kinases: Other
Other
131014997
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131014997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
LisH
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
131014997
NCBI-ProteinID:
XP_057799162
LinkDB
All DBs
Position
3:60106577..60115463
Genome browser
AA seq
1946 aa
AA seq
DB search
MEAPTDAEPQTQPEPSAPPAAEGAEERQEEDENDVLMAKAQSLIDKITASPENPSPNVLH
ALATILETQESSYMESADQSSTSNGRSSHNIGRLGNLIRENEEFFELITSKFLAERRYSV
SVQAATTRLLFSCSLTWMYPHVFEDDVLANLRGWVMEEIPRSSGDDRHWKHDTGKRKSSD
FEMLRTYSTALLAVCLPCGGQLVEDVLTSGISAKLMRYLRVRVLGDTSTNQKDGNPSIDN
KSAQTITFPKMKEDGRGRLRIAIEASHVDADTSRISEKDHDRDAALLDDPARDRERSCRQ
ACADECGIDEETPDSMVLEVDGYEAEADGEEKCNIRDYRESKTKPCGRSHREEDAEENVR
DDSSRRKTNRGFSRTRGKVRSSEGVSETEQAITSPSSGSRLGQARSVKDRSGARNQDLRR
FSDAKKSVGRNDVDPFIPHRDDNDDCFQNCKVGNKDITDLVKKAVRAAEAEARAANAPAI
AIWAAGDDAAEVVKIAALEEYKKTNDEEAAVLAASRAASTVIDAANAVPAPRNSSNGDSD
SGDSKATDAEFSEDIGEVSIPDNHSLAKLREKFCIQCLVVLGEYVEVLGPVLHEKGVDVS
LALLQRSLKHKEASSGTVLLPDILKLICALAAHRKFAALFVDRGGMQRLLAVPRIALTYL
GLSSCLFTIGSIQGIMERVCALPSNVIHQIVELALQLLERPQDHQARKNAALFFAAAFVF
RAIIDAFDSQDGLQKLLSLLNDAASVRSGVSAGQSSNSGSLRNDRSTADVLTSSEKQIAY
HTCSALRQYFRAHLLLLVDSIRPTKNIRSAPRNISRAAYKPLDISNEAMDAVFRQIQKDR
KLGPALVRARWPVVDKFLLSNGHTTMLELCQAPPVERYLHDLLQYALGVLHIVTLVPYSR
KPIVNATLSNDRVGIAVILDAANGAGYVEPEIVEPALNLLINLVCPPPSISNKPSSIMQG
HQAYSNQTGNGSAVESRDKNAERNITERAVNVPVQNEPRERNGEPASVDRGGSVAPSSSS
SINNTLSQASSSTVASGLVGDRRISLGAGAGCAGLAAQLEQGYRQARESVRANNGIKVLL
QLLQPRMVTSPAALDCLRALTCRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGGQSAG
GEQNRWQAELAQVTFELIGVVTNSGRASTLAASDAATPTLRRIERAAIAAATPISYHSRE
LLLLMHEHLQASGLAESAATLLKEAKLTPLPSLAAPSSLAHEASGQEASAIQIQWPSARA
ACGFLSDKSKISLHQEDSSFRSESAYLSSKKKILPSSAAQSHSKVPLKPEDSPVASSSKI
NFNLEKASVAADGVGTPLLSVPKSGGDADTQVRTPIVLPMKRKLTELKESGLGLSVKRLN
TGEQSLRSPCFTTPNTSRRSGLYSDATLFCTPISTPREYQSRDIDENQLTGQASSSQLPN
DPQPSGSERLTLDSLVVQYLKHQHRQCSAPITTLPPLSLLQPHVCPEPRRSLDAPSNVTS
RLSNREFRSRQGGIHGLRKDRQFVYSRFRPWRSCRDDTSSLLTCIAFLGDSSRIAGGGHT
GDLKVFDSNSNIVLDSCTSHQSPLTLLQSHFSDENQLILSSSAMDVRLWDASSVSAGPKH
SFDGIKAAKFSNSGGIFAALRSDSPRREILLYDTHTCQLDLTLSDTSTIVSGRGQAYSLV
HFSPSDSMVLWNGVLWDRRVSGPIHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLL
RSVPSLDQTTITFNASGDVIYGILRRNLEDVTSTFNTRRVKHPLFSAFRTVDAVNYSDIA
TIPVDRCVLDFATEPTDSFVGLITMDDQDEMYSSARVYEIGRRKPTDDDSDPDDAESEED
EDDEGDDDSILEGDLDVDGDSDADDMSNDDDDSVSEFDDDEEDDGDFMMDGVDFDGGGIL
EIVTEGDEDDDSDILESFSSGDEDDL
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcccacggatgctgagcctcaaactcagccggagccatccgccccgccggcg
gcggagggggctgaggagcggcaggaggaggatgagaatgacgttttgatggccaaggca
cagtcgttgatagataagatcactgcgagccctgagaaccctagccccaacgtgctccat
gccctcgccaccattctggagacgcaggaatccagctacatggaaagtgcagatcagtct
tcgacaagcaatggcaggtcttctcataatattggccgacttggaaatcttattcgggag
aacgaagaattttttgagttgataacttcaaaatttctagctgaaagaagatattcagta
tcagtacaggcagctacgacaaggcttcttttcagttgttcgctaacctggatgtatcca
catgtatttgaagatgatgtcctagctaacttaagagggtgggtgatggaggagattccg
cgctcgtctggtgatgaccgtcattggaagcatgacacggggaaaagaaaatcatcggat
tttgaaatgttacggacatactctactgctcttcttgctgtatgcttgccctgtggtggt
caacttgtagaagatgtcctaacttcaggaatatcagctaagctaatgcgttatttacga
gttcgggttttaggagacacaagcacaaatcagaaagatggcaatccatcgattgacaac
aaaagtgcacaaaccatcacgttccctaaaatgaaagaggacggtaggggtaggttacga
atagcgatagaggcttctcacgtggatgcagacacttcgagaataagtgagaaggatcat
gatagagatgctgccctgttagatgaccctgctagggatcgtgagaggagctgtaggcaa
gcatgcgcagatgaatgtggcattgatgaggaaacccctgatagtatggttcttgaggtt
gatggttatgaagcagaagcagatggtgaagaaaagtgcaatattagagattatcgcgag
tcaaaaacaaaaccttgtggaagatctcatagggaagaagatgctgaagaaaatgtgaga
gatgactcttccagacgaaaaacaaatcgtggattttccagaacaagaggaaaggttagg
tccagcgaaggagtatccgagaccgagcaagctattacctccccaagttctggaagtagg
ttagggcaggcacggagtgtgaaagacaggagtggagctagaaatcaggatctgagaaga
ttttcagatgctaaaaagagtgtaggaaggaatgatgtggatccttttatccctcacaga
gacgacaatgatgattgcttccagaactgcaaagttggcaacaaagacattacagatttg
gttaaaaaagctgtaagagctgctgaagctgaagcaagagcagccaatgctcctgctata
gccatatgggcagctggtgatgatgctgctgaagtggttaaaattgctgcattggaggaa
tacaagaagaccaatgatgaagaagctgctgtgcttgctgcttcaagagctgcttctact
gtcatagatgctgctaatgcagttcctgctccgagaaattcaagcaatggtgatagtgat
tcaggtgattcaaaggctacagatgcagaatttagtgaagatattggtgaagtctcaatc
ccagacaaccactcccttgcgaagctaagggagaagttctgtatccagtgtcttgtagtt
ctgggggagtatgttgaagttcttggtcctgttctccatgagaagggggttgatgtctct
cttgcattattgcaaagaagtcttaagcacaaagaggcatcaagtggtacggttcttttg
ccagatattttgaaattgatctgtgccttggctgctcatcggaagtttgctgcattattt
gtggatcgtggtggcatgcaaagactgcttgctgttccaagaattgcactgacatatctt
ggtttatcatcctgcttatttacaattggttcaattcaggggataatggagcgtgtttgt
gcccttccttcaaatgtaatccatcagattgttgagttggctctacaacttcttgagcgt
ccacaggatcatcaagcccgaaagaatgctgcattgttctttgctgctgcttttgtcttc
agagccatcattgatgcatttgattcacaggatggtttgcagaaactactctctcttttg
aacgatgctgcctcagtaagatctggggtttctgctgggcagtcaagtaactcgggatct
cttcgaaatgatcggtccactgcggatgtattgacctcttcagaaaaacagatagcttat
cacacttgtagtgcactgcgtcaatatttcagagcacatctccttttgcttgtggattct
attagacctacgaaaaatattcggagtgcacctagaaacatttctagggcagcatacaag
ccactggacataagcaatgaggcaatggatgctgttttccgtcaaatacagaaggatcgg
aaactgggccctgcacttgtgagagcacgttggcctgtagttgataaatttttgttatct
aatggtcataccactatgttggagttgtgtcaggccccaccagtagaacgctatttgcat
gatttgcttcagtacgcccttggtgtactgcatattgtgactttggtaccttatagccgc
aaacctattgttaatgccactttaagcaatgatcgagtgggtatagctgtcattttggat
gctgcaaacggtgctggttatgttgaacctgagattgttgagccggcattgaatctgttg
ataaatcttgtttgccctcctccatcgatcagcaacaaaccaagctctatcatgcaaggc
caccaagcttattctaaccaaactggaaatggatctgctgtggagtccagggacaaaaat
gccgaaaggaacatcacggaacgagcagtcaatgttcctgtccagaatgaaccaagggaa
cgaaatggagaacctgcttccgtggatagaggtggctcagtagctccatcatcatcatca
tctattaataacacattgtcacaagcatcgtcatctacagtggcttctggcctagtcgga
gatcgaaggatatctttaggtgctggagcaggttgtgctgggcttgctgcgcagctggaa
caaggctatcggcaagccagagaatctgttcgtgcaaacaatggtatcaaggttcttctt
cagcttctccaaccaaggatggtaacatctcctgctgctcttgattgtcttcgtgctctg
acatgccgagttcttcttggtttggcaagagatgacacaattgctcatatattaacaaag
cttcaggtaggaaaaaagctctcagagcttattcgagattctgggggccaatctgctgga
ggtgagcaaaacaggtggcaggcagagctcgctcaagtgacttttgagctgattggagtt
gtaactaattctgggcgtgcgagtactttagcagccagtgatgctgctaccccaaccttg
cggcgtattgaaagagctgccattgctgctgctactcccatttcttaccattctagggaa
ctcttgctcctcatgcacgagcaccttcaagcatctggtttagcagaaagtgcagctaca
cttcttaaagaggctaaattgacacccttgccatcattagctgctccttcatctttagca
catgaagcctctggacaggaagcttctgcaatacaaattcaatggccatcagctcgtgcc
gcttgtggattcttgtcagataaatcaaaaatttctcttcatcaggaagattccagtttc
agatctgaatcagcttacttgtcttcaaagaagaaaatattgccatcatcagctgctcaa
agtcactcaaaagttccattaaaaccagaggatagtccagtagcgtcaagtagcaaaata
aatttcaatttggaaaaagcttctgtagctgcagacggtgtgggaactccattattgtct
gttccaaaatctggtggtgatgcggatactcaggttagaaccccaatagtgttgccaatg
aaacgcaaattgacagaattgaaagaaagtgggttgggcttatcagtaaaaagactcaac
actggtgagcaatcacttagatctccttgtttcaccacacctaatacttctcgcagaagt
ggtctgtattcagatgcaactctgttctgcacaccaatatctactccgagggagtatcag
agtcgggatattgatgaaaatcagttgactggtcaggcttcttcctcccaactgcccaat
gatccacaaccttctggctctgaacggcttaccttggattctctcgttgtccagtactta
aagcaccaacatcgtcaatgttctgcaccaattacaactttacctcctctttcactcttg
caacctcatgtttgtccagaaccaagaagaagtcttgatgctccatcaaatgtcacatct
cgtcttagcaaccgtgaatttagaagtagacaggggggaattcatgggcttcgaaaggat
cgccagtttgtttatagtagattcagaccatggcgaagttgccgcgatgacactagttca
cttttaacgtgcattgcattcctaggagattcttctcggattgctggtggtgggcatacc
ggggatctgaaagtgttcgactctaacagcaacattgtattagacagttgtacaagtcat
cagtctcctcttacacttctgcagtctcatttctctgacgaaaatcaacttatactttct
tcaagtgcaatggatgtccgcctgtgggatgcatcttcagtttctgctggtcccaagcac
tcatttgatggaatcaaagctgccaaattcagtaattctggtggaatttttgcagcacta
cgatcagattcaccacgtcgggagattcttctgtatgatactcacacgtgtcagttggac
ttaacgctgtcggatacatctaccatcgtttctggtcgtgggcaggcatattctctggtt
cattttagcccgtccgactctatggtactttggaatggagttttgtgggatcgaagggtc
tcgggtccaattcatcgctttgatcaatttactgattacggcggcggcggctttcatcct
gctgggaatgaggtgattataaactctgaggtttgggatcttcgcaagtttaggctgctt
cggagtgttccatcgttggaccagacaacgataacatttaatgctagtggtgatgttatc
tacggcattctgaggagaaatctggaggatgtcacatcaactttcaacactcgtcgcgtg
aagcaccctctcttctctgctttccgcactgtggacgccgtgaactattccgacattgcc
acgatccccgtggaccgctgtgtgctcgactttgcaaccgaaccgactgattcattcgtg
ggtctaatcacaatggacgaccaggacgagatgtactcctccgcgagggtgtatgagatc
ggaaggcgcaagccgacggacgacgactccgatcctgacgacgcggagagtgaggaggat
gaggacgacgaaggtgatgacgattcaatcttggaaggggatctggatgtggatggtgat
agcgatgctgatgatatgagcaatgacgacgacgacagtgtgagcgagttcgatgacgac
gaggaagatgatggggatttcatgatggatggtgtcgatttcgatggcggtgggattctg
gagattgtgacggaaggcgacgaagacgacgacagcgacattcttgaatcttttagcagc
ggggatgaggatgatttgtaa
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integrated database retrieval system
