Salvia miltiorrhiza (redroot sage): 131015037
Help
Entry
131015037 CDS
T09291
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smil01002
]
131015037
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131015037
Enzymes [BR:
smil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131015037
Peptidases and inhibitors [BR:
smil01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131015037
Ubiquitin system [BR:
smil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131015037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
131015037
NCBI-ProteinID:
XP_057799212
LinkDB
All DBs
Position
3:60423021..60429410
Genome browser
AA seq
802 aa
AA seq
DB search
MHVAADLNWFLQFIVLALVGIFGLLYLVRNTASRYFVVDSNFDSSAADYSSLDRRKRDSM
SEAAGGAAEGFDSCAVCGHLTKKQCAGCKMVKYCSEACQKSHWTSEHKTRCKEMKSLYKA
NYTIPKSTLRGRIASVAPLGGSSKIYKPSNKILFPYEEFLEFFTWDKPGYPPCGLLNCGN
SCFANVVLQCLAYTRPLVAYLLEKGHRRECQRNDWCFLCEFQLHMERASRSANPFSPMNI
LSRLPNIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGEKVVHPSFQETTLIQHIFGG
RLRSQVICAECKNVSNQFENMMDLTVEIHGDAGSMEECLDQFTAKEWLHGDNMYKCDGCN
AYVMAWKRLTVQRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSELEDGNDVYK
LYAVIVHVDMLNASFFGHYICYVKDFRGNWYRIDDCKVASVDLDEVLSQGAYMLLYSRIH
ARPSCLLPTELLRKEESEKVKIVEVDSSMKQHAESSPDAVFIDSPVDSEQSSNNGSGNKV
NNGEEFPSTADAEDAEGDTKMASPDISLPIVSDSELHNNDEFPTTPKEVPSTRNNDNEPH
LTSTSLIDSTSTELDAKNEASSSASDVEASCGNKLDSNAGSSRMLTEESTTVGNCKDSPD
SSTTGNVPAIDTTANAVSDKENSASSTSQDGNIGPGNGLSSSDDTQSSTKKANGGSSAEK
CKPLFRPGFFGKQPLRKCVKLDNHTKEVAKSCLLRENGGLLKDRELHITHENGDVSAESD
MCKSLENGDSASEYDEIDASVE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgcggcggatcttaactggttcctgcaattcatagtgttggcgttagttggg
attttcgggctgctgtatttggtgcggaacacagcgtcgaggtacttcgtggtggactcc
aatttcgattcctccgccgccgattattcgtccttggatcgccggaagagggacagtatg
tcggaggccgccggtggcgctgccgagggttttgattcctgcgccgtgtgcggccatctg
acgaagaagcagtgcgccggctgcaagatggtcaagtactgttctgaagcttgtcaaaaa
tctcactggacttctgagcacaagacgagatgcaaagagatgaagtcactttacaaagct
aactatacaataccaaaatccactttgaggggaaggatagcttcagtagcacctttgggt
ggaagttcaaagatttacaagccttcaaacaagatactttttccatacgaggaatttcta
gaatttttcacttgggacaaaccaggctatcctccttgtggacttcttaactgtggaaac
agttgctttgctaatgttgttcttcaatgtctcgcatacacccggccgcttgttgcctac
ttgttggagaaaggtcaccgcagagaatgccaaaggaacgattggtgttttctttgtgaa
tttcaattgcacatggaaagggctagccgaagtgctaatccattttctccaatgaacatt
ctttcacgattgcctaacataggtggtaatcttggatatgggaaacaggaggatgcccat
gaatttatgaggtttgccattgacacaatgcagtctgtgtgccttgatgaatttggtgga
gaaaaggttgttcatcctagctttcaagagacaacccttattcaacatatatttgggggt
cgtcttcgatcacaggttatatgcgcagaatgcaaaaacgtttcaaaccaatttgaaaat
atgatggatttaactgttgaaattcatggggatgctggatctatggaggagtgtttggat
caatttactgccaaggagtggcttcatggggataatatgtataaatgcgatggctgcaat
gcatatgtcatggcatggaagcgccttactgtccagcgagcaccaaacattcttacaatt
gccttgaaaagattccagagtgggagatttgggaaacttaacaagagggtgactttccca
gagactctggatcttagcccatacatgagtgaattggaagacggaaatgatgtttacaag
ctgtatgctgttattgtccatgtggacatgctgaatgcatctttttttggccattacatc
tgttatgttaaggatttccgtggaaactggtacagaattgatgattgcaaggttgctagc
gttgatttggatgaggtgctttcacagggagcttatatgctcttgtacagcaggatacat
gctcgcccatcatgcttgcttcccactgaattgttgaggaaagaagaaagtgagaaagtg
aaaatagttgaagtggactcttccatgaaacaacatgcggagtcctctcctgatgcagta
ttcattgacagtcccgtcgattcagagcaatcatctaataatggttcgggaaataaggtc
aataatggggaagaatttccatcgactgcagatgcggaagatgcagagggagatacaaaa
atggcatctcctgacataagtttgcccattgtcagtgattctgaacttcacaataatgat
gaatttcccaccacaccaaaagaagttccttctaccagaaataatgacaatgagccgcat
ctcactagcacttcattgattgattctacttctacagaattggatgccaagaatgaggca
tcctcgtctgcttctgatgttgaagcaagttgtggcaataaactcgacagcaatgcaggt
tcatccagaatgttgactgaagagtcaactacggttgggaactgtaaagattcgccagac
agcagcaccactggtaacgttccagccatcgatactaccgccaatgcggtttcagataaa
gagaactctgctagttcaacatctcaggatggaaatattgggcctgggaatggcttatca
tcctctgatgatactcaaagctctactaagaaagcaaatggaggaagttctgcggaaaag
tgtaagccactcttccgtcctggtttttttggaaaacagccactaaggaaatgtgttaag
ctggataatcatacaaaagaagttgcaaagtcttgtttattgcgtgaaaatggtggctta
ttgaaagacagggagcttcacatcacacatgagaacggagatgtttctgcagaatctgat
atgtgtaagagcctcgagaatggagattccgcgagtgaatatgatgagatagatgcttca
gtcgaataa
DBGET
integrated database retrieval system
