Salvia miltiorrhiza (redroot sage): 131015275
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Entry
131015275 CDS
T09291
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131015275
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131015275
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
131015275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
Prok-RING_4
SLX1_C
Rad50_zn_hook
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
131015275
NCBI-ProteinID:
XP_057799584
LinkDB
All DBs
Position
3:complement(62687438..62689096)
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AA seq
390 aa
AA seq
DB search
MDKFPSKMDHLRQLIALLPLLVCAEARNTSNEHDVNPLKPSMAVVLVVLSIMFSLTFLIL
AYAKFCHGTGSGPSDLLQNPNGSVGTRARFSGVDKTTIESLPFFRFSSLRGSKEGLECAV
CLSRFEDTELLRLLPKCRHAFHISCIDTWLENHSSCPLCRHKLDAGDIKSSRHSSSSWEE
PSLEFFIQREQSQSQGRSSRFNLANTLHKLTRGRRPDAPLAQEFKNHSNGTRILHHVKHR
IIVSDVIHNSRWSDVNSSDLMSLNASLLNLPTTSGRFNDEAAAREQILKIKEDLERKRLF
ESKIAAAETSSMLSRSADPAQKRSMSEITNVSRFTDTNSSSSRISGFSTSLNSDKDEKVR
RLWLPIARRTIQWFSGQETSSNDAQPKPDV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttccatctaaaatggatcatctgagacagctgattgctcttctgcccttg
ctggtgtgtgcagaagctcgaaacacgagcaacgagcacgacgtgaatccacttaaaccg
agcatggcggtggtgctagtagtcctatccatcatgttcagcctcactttcctcatcctc
gcctacgccaagttctgccacgggacgggatccgggccctcggatctcctccagaaccct
aacggttccgttggaacgagagcccggttctcgggcgtggacaagaccaccatagagtca
ctcccattcttcagattctcctcactccggggctcaaaggaaggcctggagtgcgccgtg
tgcctctcaagattcgaggacacggagctcctccgcctcctccccaaatgccggcacgcc
ttccacatcagctgcatcgacacgtggctggagaatcactccagctgccccctctgcagg
cacaagctcgacgcaggggacatcaagagctcgaggcacagcagcagctcgtgggaggag
cctagcctcgagttcttcatacagagggagcagagccagagccagggcaggtcatcgcgg
ttcaacctcgccaacacgctccacaagctcacgagagggaggaggccggacgccccgttg
gctcaagaattcaagaaccacagcaacgggacgaggattctccaccatgtgaagcacagg
atcattgtatcagatgtcatacacaacagcaggtggagcgatgtcaactcctcggacctc
atgtccctcaacgcctcgttgctgaacctccccaccacaagcgggaggttcaacgacgag
gctgcagcaagagagcaaatcttgaagatcaaggaggatttggagaggaagaggctgttt
gagtccaagattgctgctgctgaaacttcaagcatgctgtctagatcagctgatccggca
cagaaaagatcgatgtcagagatcacaaacgtgtcaagattcacggatacgaactcgagc
agcagcaggatcagtggattctcaacttcactcaactcagacaaggatgaaaaggttagg
aggctgtggctacctatagctagaagaaccattcagtggttttccggccaagaaacgagc
tcgaacgacgcgcaacctaagccggatgtctga
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