Salvia miltiorrhiza (redroot sage): 131015323
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Entry
131015323 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: ribosome biogenesis protein bms1-like
KO
K14569
ribosome biogenesis protein BMS1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131015323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
131015323
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
90S particles
GTPase
131015323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA_16
AAA_22
MMR_HSR1
AAA
Motif
Other DBs
NCBI-GeneID:
131015323
NCBI-ProteinID:
XP_057799660
LinkDB
All DBs
Position
3:complement(63378561..63387895)
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AA seq
1217 aa
AA seq
DB search
MGKDGDSEQPHKSHRIRKSGASAKKKSKSKPAEGLSKEQQKINNPKAFAFTSSVKAKRLQ
SRATEKEQKRLHVPTIDRNTGEPAPFVVVVQGPPQVGKSLLIKCLVKHYTKHNLPEVRGP
ITIVSGKQRRLQFVECPNDINGMIDCAKFADLALLLIDGSYGFEMETFEFLNILQNHGFP
RVMGVLTHLDKFEDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYTKREVHNLAR
FISVMKFPPLSWRASHPYILVDRFEDVTPPDKVHMNGKCDRNVTLYGYLRGCNLKKGTNA
HIAGVGDYPLSGVTALADPCPLPSVAKKKGLRDKEKLFYAPMSGLGELLYDKDAVYININ
DHFVQFSKDDGAKAEGTEKGKQRDVGVELVKSLQNTKYSVDEKLEKSFISLFGKKPVDIS
EPPTGVIEAQEVVNRDVLLEPVDHYESDMKDDDSESDEEGDTEDENGLESLDRERAYNNQ
SSSKSIDDSSDEETFYEAEQDRVTQGNFKEQSDLHGGRVRRKAVFENEMDTDNKDSGEDD
DSSDNDETEKGDEDVLSHSDFSADGEEDEMGNISKWKESLLERTASRQNINLMQLVYGTP
GSXNLPDDMKDDVDEESDDEIFKLKGEGKKKLKEGINDNDVDSDDCSKFVSSGSLEDWKS
EDRIESIRDRFVTGDWSKAQLRNQLSEGTAGDEDEVFAEFEDLETGQKYEGDQADDVGNS
SKDDALAAAERKLKKLALRAKFDAQYNGSEVADEEDDGDNDTKNNRGQSNGGGNGGGFFD
KLKEEIELRKQMNIAELNELDEVTRVEIEGFRTGTYLRIEVRDVPYEMVDNFDPFHPILV
GGLALGEENVGYMQVRLKRHRWHKKVLKTRDPIIMSIGWRRYQTVPIYAIEDRNGRLRML
KYTPEHMHCVAMFWGALAPPHTGVVAIQNLANNQASFRITATATVLEFNHAAKIVKKLKL
VGTPCKIFKKTAFIQDMFTSDLEIARFEGAAIRTVSGIRGQVKKAAKEEISNKSTKKGGV
AKGGIVRCTFEDRIKMGDTVFLRAWIQVEVPRFYNPLTTALQPRDKTWQGMKTVAELRRE
NNLQVPVNKDSLYRPVERKPRKFNPLVIPKSLQAALPFASKPKDLPARQQPLLKDRRAVV
MEPHERKVHALVQQLLLIKTEKTRKRKLKEAEKRKVLEAEKSKEEQISKKRQREERRVRY
REEDKMKKKKIRRNPQS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacggcgacagcgagcagccacacaagtctcataggattcgaaagtctgga
gcttccgcgaagaagaaatcgaagtcgaagccggccgaaggcctttcgaaggagcagcag
aagataaacaatcctaaggcgtttgcgttcacttcttctgtgaaagccaagcggctccaa
tcacgagctacagagaaggagcagaaaaggcttcatgtaccaacaattgatcggaataca
ggagaacctgctccatttgttgttgtagttcagggacctcctcaggtggggaagtcattg
ctgatcaagtgtctagtaaaacattacacaaagcacaatttacctgaagttcgtggacca
attacaatcgtatcaggcaagcaacggaggctgcagtttgtggagtgtccaaatgatatc
aatgggatgatagattgtgcgaagtttgctgatttagctttgctacttattgatgggagc
tatggctttgagatggaaacatttgagtttcttaacatattacaaaatcatggatttccc
agagtaatgggtgttcttactcacctggacaagtttgaggatgtaaagaaacttaagaaa
acaaaacaacgactcaagcaccggttttggactgagatctatgatggagcaaaattattt
tatttatctggccttattcatggaaagtacactaaacgtgaagtacataatctagcaagg
tttatttctgtaatgaaattccccccgttgtcatggagagcttctcatccttacatctta
gtagatcgttttgaagatgtcacacccccagacaaggttcacatgaatggcaaatgtgat
agaaatgttaccttgtatggatacttacgaggctgcaatctgaagaagggaacaaacgca
catattgctggcgtgggtgattatcctttgtctggagtaacagcattggctgatccttgc
cctcttccctcagttgccaaaaagaagggactgcgtgataaggaaaaactattttatgcc
cctatgtccggcttaggggaactactttatgacaaagacgctgtctatataaacataaat
gatcactttgtacagttctctaaagatgatggagctaaggcagaagggacagaaaaagga
aaacaacgtgatgttggtgtcgaattggttaaatcattacagaacacaaaatattctgtt
gatgagaagttggaaaaaagttttatctcactttttgggaaaaaacctgtcgacatatct
gaacctccaactggtgtgattgaggctcaggaagttgtcaatcgggatgtactattggag
cctgtagatcactatgaatctgacatgaaagatgatgatagtgaatcagatgaagagggt
gatactgaggatgaaaatggtctggaatccttagatagggagagagcttataataatcaa
tcatcttcaaaatctatagatgatagctctgatgaggaaaccttctatgaggcagagcaa
gatcgtgtgacacaaggcaacttcaaggaacagagtgatttgcatgggggaagggtgagg
agaaaagctgtttttgaaaatgaaatggatactgataataaggattctggtgaagatgat
gattcaagtgacaatgatgaaacagaaaaaggagatgaagatgtgctttctcattctgat
ttttcagctgatggagaagaagatgagatgggtaacatttccaaatggaaggaatccttg
ttagaacgaactgcctctagacagaatattaatcttatgcaacttgtttatgggacgcct
ggatcannaaatcttcctgatgatatgaaggacgatgttgacgaggaaagtgatgacgaa
atttttaagctgaaaggggaaggaaaaaagaaattgaaggaaggaataaatgacaatgat
gttgatagtgatgactgctcaaaatttgtaagtagtggaagtcttgaggattggaagagt
gaggacaggattgaaagtattcgtgatcgttttgtcactggagactggtctaaggcacaa
ctgagaaatcaactctcagaaggtaccgctggtgatgaagatgaagtctttgctgaattt
gaagacttggaaactggtcagaagtatgagggcgatcaagcagatgacgttggtaactcc
agcaaggatgatgccttggctgctgcggaacgaaagctgaaaaaattggctcttcgtgca
aaatttgatgctcaatacaatggttcagaggttgccgatgaagaagatgatggtgacaat
gacaccaagaataatcgtggtcaaagcaatggaggtggcaatggaggtggcttctttgac
aagttaaaggaggagattgaactgcggaagcaaatgaacattgctgaattgaatgaactt
gatgaagttactcgtgttgagatagaaggttttagaactgggacttaccttagaattgaa
gttcgtgatgtgccctatgaaatggttgataattttgatccttttcatcctattcttgtc
ggtggtcttgcgctgggggaggaaaatgtgggatatatgcaggtacggttgaagcggcat
agatggcacaagaaagtattgaagactagagaccctataatcatgtctattggatggaga
cgctaccaaactgtaccaatatatgccattgaggaccgtaatgggcgtcttcgcatgctc
aaatatactccagaacatatgcattgtgtggcaatgttttggggcgcacttgctcctcct
catactggggttgttgctatccagaacttagctaataatcaggcatcatttaggattact
gctactgctacagtcctagagttcaaccatgctgcaaagatagtaaagaagctcaagcta
gtcggtactccttgtaaaatcttcaagaagacggctttcatacaggacatgtttacttca
gatcttgaaatagctaggttcgaaggcgctgctattcgaactgttagtggaatccgtggt
caagtgaagaaggctgctaaagaagagatttctaacaagtccacgaagaagggtggagtt
gcgaagggcggcattgttagatgcacatttgaggatagaataaaaatgggcgacaccgtt
ttcttgcgtgcttggattcaggtggaagttcctcgtttttacaaccctctgacaacagcg
ttgcagccgcgtgataagacctggcagggaatgaaaacagttgccgagctaaggagggaa
aataaccttcaagtgccagttaacaaggattcactctacaggcccgttgaaaggaagccg
aggaagttcaatccattggttatccccaagtcactacaggcagctctcccgtttgcatcg
aaaccgaaggacttacctgctcgacaacagccattgcttaaggataggagagctgtggtc
atggagcctcatgaaagaaaagtgcatgctcttgtccaacaacttctactcattaaaact
gagaagacgagaaaacggaaactgaaggaagcggaaaagaggaaggtactagaagcggag
aaatcaaaggaagagcagatctcgaaaaagagacaacgggaggaacgacgggtaaggtac
cgagaagaggacaaaatgaagaagaagaagatccgcaggaatccacaatcatga
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