Salvia miltiorrhiza (redroot sage): 131015397
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Entry
131015397 CDS
T09291
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131015397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131015397
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
131015397
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
131015397
NCBI-ProteinID:
XP_057799760
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Position
3:complement(64108932..64112757)
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AA seq
391 aa
AA seq
DB search
MGMTEATAVMGDASSSSTSDAGPSGSGGGVRTFPLAAQPEIMRAAEKDEQYASFVYDACR
DAFRHLFGTRVAVAYQSETKLLGQMLYFVLTTGAGKQTLGEEYCDITQVAGPHGLPPTPA
RRSLFILYQTAFPYIAERISSRIASRGLTMADMLSDDAMDFETSSSSQIQISAGAEVASS
TLSRLKARIAGMWSSTVRRWPSVLPIARELFMLVLRTNLMFFYFEGLYYHLSKRASGIRY
VFIGKPTNQRPRYQILGVFLLVQLCIIAAEGLRRSNLSSLATSIQPTTLGDYQNLTGRSL
PVLNEEGHLITDDSAKTSLVSESTSTSEPQVSGMSKCTLCLSNRQSPTATPCGHVFCWNC
IMEWCNEKPECPLCRSPVTHSSLVCLYHSDF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggggatgacagaagcaactgcggtcatgggagatgccagcagcagtagcacctcggat
gccggacctagtggaagcggcggcggcgttcgaacctttccgctggcggcgcagccggaa
ataatgagagcagctgagaaggacgaacagtacgcttccttcgtctacgacgcctgccgc
gacgccttccgccacctctttggtacaagagttgctgttgcatatcagagtgagacaaag
cttttggggcagatgctctatttcgtattaaccactggtgcgggaaaacagacccttgga
gaagagtactgcgacatcactcaggttgcaggaccacacggacttcctccaaccccggca
aggcgctctctttttattctttaccagacagctttcccgtatattgctgaaaggataagc
tcgcgtattgcttccagaggccttactatggctgatatgctatccgacgatgccatggat
tttgaaactagctcgagcagtcaaattcagatatctgcaggtgctgaagttgcatcatca
actttgtcaagattgaaagccagaatagctgggatgtggtcatctacagttcggaggtgg
ccctcagtgctacctatagctcgtgagcttttcatgttggttcttcgtacaaacctcatg
ttcttttattttgaaggcctatattaccatttgtctaaacgagcttctgggattcgttat
gtgtttattggcaaaccaaccaatcaaaggcctagatatcaaatattgggcgttttcctt
ctagttcagctctgtataattgctgctgaaggattaaggagaagcaatttgtcttctctt
gcaacttcgattcagccaacaactcttggagattatcaaaatttaacaggaagaagttta
cccgtcttaaacgaggaaggccatctcataactgacgactctgcaaagactagtttggta
tcagaatctacatctacttcagagcctcaagtgagtggaatgagcaaatgcacactctgc
ctgagcaatcgccagtccccgactgccactccttgcggccacgtgttttgctggaactgc
attatggagtggtgtaacgagaagccggagtgccctctttgtcgttcgcccgtgactcat
tcgagcctcgtttgcttgtatcattccgacttttag
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