Salvia miltiorrhiza (redroot sage): 131015568
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Entry
131015568 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00531
Glycosaminoglycan degradation
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
131015568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smil00536
]
131015568
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
131015568
Glycosaminoglycan binding proteins [BR:
smil00536
]
Heparan sulfate / Heparin
Enzymes
131015568
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
131015568
NCBI-ProteinID:
XP_057799977
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All DBs
Position
3:complement(64468803..64471378)
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AA seq
532 aa
AA seq
DB search
MMISGMAASLLGVSFWLYLASRGSTGVVSQSANGTVHINGSSSIAEIDEDFVCATMDWWP
PTKCDYGTCSWGSASLLNLDLSNKVLLNSMKAFSPLKIRLGGTLQDKLRYQTSNDTTPCT
QFIRNSSEMFGFTQGCLPLSRWDELNIFFKTAGAKVIFGLNALTGRTIGAGGVCTGAWDP
TNAESLMWHTVNNGYTIHGWELGNELSGNGVGASVAADQYAADVITLDRKVQEIYKGFNT
KPLVLGPGGFFDKTWFTRFVNAASGSLQVVSHHIYNLGPGVDDHLIEKILDPSYLDGEAE
TFKDLESIVKSSASRGVAWVGEAGGAYNSGRNLVTNAFVFSFWYLDQMGMSATYDTKTYC
RQSFIGGNYGLIDTNTYVPNPDYYSALLWHRLMGRRVLSTNFNGTSKIRTYAHCSKNRNG
IILLLINLDNTTTVEVGVSVENGGVSNEKLTLEQPARLTRKAVRYREEYHLTAKDGDLHS
RTMLLNGEILQLNSSGQIPPLNPRRVDSSLPITVAPYSILFARIPISLPACK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatctggcatggctgcttctctgcttggagtaagcttctggctctacttagca
agccgaggctcaacaggtgtcgtctctcagagtgcgaatggaacagtgcatatcaatgga
tcttcttccattgcagagatagacgaagatttcgtctgtgctacaatggactggtggccg
cctacaaaatgcgactacggcacttgcagctggggaagtgcttcacttctcaatctggat
ttgagcaacaaggttctgctaaactcaatgaaagccttttctcctctgaaaatcagactt
ggtggaactctgcaagacaaactcagataccaaacatcaaatgatacaactccatgcact
caattcatcaggaatagctctgagatgtttggattcactcaaggctgcttgcccttatcg
cgatgggacgagctcaacatcttcttcaaaacagcaggagccaaggtcatatttggtctg
aacgcgctgactggtcgaaccattggagccggtggggtatgcaccggagcttgggatcct
accaatgcagagtctctaatgtggcacactgtcaacaatggctacaccatccatgggtgg
gagcttgggaatgaactgagtggcaacggcgtaggagcaagcgttgcagctgatcaatac
gcagctgatgtgatcacacttgaccgcaaagtgcaggagatctataagggcttcaacacc
aagcccttggttcttgggccgggcggcttctttgataaaacttggttcacaagattcgtc
aacgcagcctccggatcacttcaagtcgtctcacaccacatttacaatcttgggccagga
gtggacgatcatttgattgaaaagatactcgacccatcgtatcttgatggcgaagcggag
acatttaaggatcttgagagcattgtgaagagctcagcaagtagaggtgttgcatgggtt
ggtgaagctggaggggcttataacagtggcagaaatcttgtcacaaatgcatttgtgttt
agtttctggtatctggatcagatggggatgtctgctacctatgataccaagacatactgc
agacagtccttcattggcgggaactacggtctaatcgacaccaacacctatgttcccaac
cccgattactatagtgcacttctttggcatcgtctcatgggaaggcgagttctgtcaaca
aacttcaacgggacgagcaagatccgcacctatgctcattgttccaagaataggaatgga
atcatattactactgatcaatctggacaacactactacagttgaagttggggtttctgtt
gaaaatggtggtgtgtcaaacgagaagctgacgcttgagcagcctgctcgactaacacga
aaggcagtcagatacagagaagaataccatctaactgcaaaagatggagacttgcatagc
agaacaatgcttctaaatggggaaatactgcaactaaattcatcagggcaaatacctcca
ttaaatcctagaagagtagactcctcactacctataactgttgctccctactccatacta
tttgctcggatacccatcagcctccccgcttgcaaataa
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