Salvia miltiorrhiza (redroot sage): 131016081
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Entry
131016081 CDS
T09291
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131016081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
131016081
03029 Mitochondrial biogenesis [BR:
smil03029
]
131016081
Membrane trafficking [BR:
smil04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131016081
Atg1 complex
131016081
Mitochondrial biogenesis [BR:
smil03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131016081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
131016081
NCBI-ProteinID:
XP_057800637
LinkDB
All DBs
Position
3:complement(46539325..46543644)
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AA seq
605 aa
AA seq
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MDLHSYPHGEHGRFEQIFNQFLLKSLHIILDSRVPMNRPPSRGGEIRKSDRWFNLVLGDR
PAAMDSLSFWNRSLMEPMVIDIILVQELRDSLSEHDSRSSLTTEMFAETVIERWVVQYEY
QRSMAPQIGDAFYKKTYKKSIILLRSVYSMLRLLPAYKAFRKQISFKQNCDFEINYKICS
FGSPLSRSEEESMKNYSFIPIDAQQGRLSVSVMYREDLSDFNLDSCVSHPIEIITDYVGS
PLTDPMRAFPCTSSEKGHSTSFQTRGRQSGPSSPFQRPHSWSSGLQRELSPQQGQPYSAS
PPLYRSPYEYSASPTDTYIQRNPNQRLPANQKAPCDEILSPPFSSSPSPSPPTKSVIPFH
NRRHPETAPMSIPHPMMARSPRYLSPNLSDPSRHSLPPLSPRNTKYDSSSHESPSGIRSI
RRLDSARTGELSNTPTNAGPRLSRDSKEDSGRFSSLLSSSSSPRVGFSRTSSRLSFQDDF
GDCDCPFIVDDVDPPDNQTSPNIDGRNSSEVSSLAPSTMKKSQDAAVGALVHMLKTAPPL
RQESCYYNTQSSKTELEGEVGAASEFFKPRKTSDAFEELKVYRQMKDLLLSKSAAHLVSK
EKTEF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcacagctatcctcatggtgaacatggaagatttgagcaaatatttaatcag
tttcttctaaagagcttgcacataattttggattcaagggttccgatgaaccggccgcct
agccggggaggggaaataaggaagagcgatagatggtttaatttagtgttgggggatcgc
cctgcagctatggatagcttaagtttttggaatagaagtttgatggaacctatggtgatc
gatattatacttgttcaagaattgcgtgattccttgtcagagcacgattctcgctcctct
ctgaccacggagatgttcgctgagacggttatagagaggtgggtagttcagtatgagtat
caaaggtctatggctcctcaaattggtgatgccttttataagaagacatacaagaaatca
atcatactactgcgctcagtttattcaatgctgaggctccttccagcgtataaggccttc
cgtaaacaaatatcgtttaagcagaactgtgactttgagatcaattacaagatctgctcg
tttggttctccattgtcgagatcagaggaagaatcaatgaagaactattcttttattcct
attgacgcccaacaaggtcgcctttctgtatctgtgatgtaccgtgaagatctatctgac
tttaatctagattcttgtgtatctcatcctattgagatcattaccgattatgtaggtagc
cctcttactgaccctatgagggcatttccttgtacctcatctgagaagggtcattctaca
tccttccagacaagagggaggcaatcaggtccttcttcaccatttcaacgacctcacagc
tggtccagtggtctccaaagggagctttcgccacaacagggccaaccttatagtgcatct
ccaccattatatcggtcaccgtacgagtattcagcgtctcctacagatacgtacatccag
agaaacccaaaccaaaggctcccggctaatcaaaaagcaccatgtgatgaaatactttcc
cctccattctcatcatctccttctccatccccccctacaaagagtgtaattccttttcat
aatcggcgtcatccagaaactgctccaatgagtattcctcatccaatgatggctagaagt
cctagatacctttctcctaatttgtccgatccaagtaggcactctcttccacctctatca
ccgaggaatacaaagtacgactcatcatcccatgaatcaccatctggaatcaggtcaata
aggagactggactcagccagaactggagaattgagcaacactccaacaaatgctggtccg
aggttatctcgagactcaaaagaggattctggacggttttcaagtttgctgtcttcaagt
agttctccacgtgttggattctcaaggacctccagtcgattgtctttccaggatgatttt
ggtgactgtgattgtccatttattgtggatgatgtggatcctcctgataaccaaacaagt
ccaaatatcgacggaagaaacagttcggaagtctcttcactagcaccctcaacaatgaag
aagtcgcaggacgctgctgtcggtgccctcgttcacatgctgaagacagctcctcctctc
cgtcaagaatcctgttactacaacactcagtcatctaagactgagctcgagggagaagtt
ggagctgcttccgagttttttaagcctcgaaaaacgtcagatgcctttgaagaactcaag
gtttacagacaaatgaaagatttgctactttccaagagcgcagctcatctggtcagcaag
gaaaaaaccgagttctga
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