Salvia miltiorrhiza (redroot sage): 131016083
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Entry
131016083 CDS
T09291
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131016083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131016083
03036 Chromosome and associated proteins [BR:
smil03036
]
131016083
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131016083
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131016083
PBAF complex
131016083
GBAF(ncBAF) complex
131016083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
131016083
NCBI-ProteinID:
XP_057800639
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All DBs
Position
3:complement(45774815..45777866)
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AA seq
542 aa
AA seq
DB search
MAANNNNPQKNIGASSPFGNSMPVNPSLQQQLGSGFQGQFQFSEAQAQALAQAQSKAQAQ
AQAQVQAHAHAQMMAAHAQLQAQLQAAQGLSFNQGHPGGMGNLGSQSPSLSGAGSVGAKR
FPQKPPARPPSFITSNVASPMRPMDASAAARRKKQKLPEKQLHERVAAILPESALYTQLL
EFESRVDAALTRKKIDIQDALKTPTYLQKTLRIYVFNTFANQIRTIPKKPNAEPPTWTLK
IIGRILEEGMDADQAAMMQKSNPSYPKFSGFFKRVTITLDQKIYPDNHLIIWDSARSPAP
HEGFEVKRKGDQEFTASIRLEMNYMPEKFKLSAALTELLGIEVDTRARIMAAIWHYVKAR
KLQCPDDPSSFNCDPPLQRVFGEGKVKFTAVTQKITPHLFPPQPIHLEHRIKLSGNSPVG
TACYDVLVDVPFPIQRELNALLANTEKTKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQ
SPVEFINSLVDSQNKDLKLVSGEGSRNAEKERHSDFYNQPWVEDAVIRYLNRKLPGDASG
NT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaataacaacaatcctcaaaagaacattggggcttcatccccttttgggaat
tctatgcctgtgaatccttcactgcagcagcaactggggtctggatttcagggccagttt
cagttttcagaagctcaggcgcaagcgcttgcccaggctcagtcgaaagcacaggcgcaa
gctcaggctcaggtgcaggctcatgcccatgctcaaatgatggcagctcatgcacaactg
caagcacagttgcaagctgctcaggggctttcattcaatcagggtcatcctggaggaatg
gggaatttgggttcacaatctccttctctttcaggagctggaagcgtgggagccaaacgc
ttcccacaaaaaccacctgctcgtccaccgagctttataacttccaatgtggcctctcca
atgcggccaatggatgcctcagctgctgctcgtaggaaaaagcagaagctcccggagaaa
cagttacatgaaagagtcgcagctattttgccagagtcggctctttacactcagctcctt
gagtttgagtctcgagtagatgctgccttgacacggaagaaaattgatatccaagatgcc
ctaaagacaccaacttaccttcagaaaaccctccgtatctatgtcttcaacacttttgct
aatcagattcgcaccattcccaagaaaccaaatgctgagccgcctacgtggactcttaaa
attatagggaggattttggaggagggaatggatgctgaccaggcagccatgatgcagaaa
tcaaacccctcgtatccaaagttctccggattcttcaagagagttactataaccctggac
cagaaaatataccctgataaccatttaattatatgggacagtgctcggtcacctgctcct
catgaaggttttgaggtcaagaggaaaggggaccaagaatttactgcaagcataagacta
gaaatgaattatatgccagagaagtttaaactttcagcagctctgacagagcttttaggt
atcgaggtcgatactcgtgctagaattatggctgcaatatggcattatgttaaggctcga
aaattgcagtgcccagatgacccgtcttctttcaactgtgatccaccactacaaagagta
tttggggaaggcaaagtcaagttcacggcagtcacccaaaaaattacaccccatctgttt
cctccacagcccatacatctggaacataggataaaactttcaggcaatagtcctgttgga
actgcatgttatgatgtattggttgatgtacccttcccgatacagagagaattgaatgct
ttgttggccaacactgaaaagacaaaagagatagatgcttgtgacgaagcaatttgtgct
gcaattagaaagatccatgagcaccggaggagaagggcattctttcttggatttagtcag
tcacctgtagagtttattaattcccttgtagattctcaaaacaaggatctgaagcttgtt
tctggagaaggtagtcgcaatgcagaaaaagagcgccattcagatttctacaaccaacca
tgggttgaagatgctgtcattcgctacctcaaccgaaagttgccaggagatgcctctggc
aacacatag
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