Salvia miltiorrhiza (redroot sage): 131016094
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Entry
131016094 CDS
T09291
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131016094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131016094
03036 Chromosome and associated proteins [BR:
smil03036
]
131016094
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
131016094
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
131016094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SCAP
Ge1_WD40
Beta-prop_IFT122_1st
RMC1_N
Beta-prop_RIG_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
131016094
NCBI-ProteinID:
XP_057800656
LinkDB
All DBs
Position
3:46304293..46307288
Genome browser
AA seq
456 aa
AA seq
DB search
METGMIHSSASSNKSQSRCPLQEQFLQRRSSRENLDRFIPNRSAMDFDYAHYMLTEGKKG
KENPSINSSPSREAYRKQLAETFNMNRTRILAFKNKPPTLVEAIPNDFSVAAHQAKPAKP
RRHIPQTSERTLDAPDILDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGSTSELVTVDE
ECGPVTSVKWAPDGRHIAIGMNNSEVQLWDSTANRLLRTLRGGHASRVGAMDWNNHILTT
GGMDSRIINNDVRVRAHVVETYRGHQQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASS
NAPTQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDRCIKFWNTHTGACLNSVDTGSQ
VCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKVAELTGHTSRVLYMAQSPDGCTVASA
AGDETLRFWNVFGKPEVAKAAPKTAAEPFAHLNRIR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaggaatgattcattcgtctgcatcttcaaacaagtcccaatcgcgatgcccg
cttcaagaacagtttcttcagagaagaagttcaagggaaaacttggatcggttcattcct
aatagatctgcgatggattttgattacgcgcattacatgcttacagaaggtaagaaaggt
aaggaaaacccatctatcaactcttctccatctagggaggcatataggaagcagcttgca
gaaaccttcaacatgaacagaactcgcattctggctttcaagaataagccacctacccta
gtcgaggccatcccgaatgatttctcagtggctgctcaccaagcgaagcctgctaaaccc
cgtcgccacattccacagacttcggagaggacattagatgcccctgatattctggatgac
tactatttgaacttgctagactggggaagcagcaatgttctttcaattgctcttggaagc
actgtctatttgtgggatgcctccgatgggagtacctcagaacttgttactgtggatgaa
gaatgtggccccgtgaccagcgtcaaatgggctcccgatggaaggcacatcgccattggt
atgaacaactctgaggtccagctgtgggactcaactgctaatagacttctaagaactttg
agaggcggccatgcatcacgggttggtgctatggactggaacaatcacatcttgactaca
ggagggatggatagtcggatcatcaacaatgatgtgagagtgagagcacacgttgtcgaa
acctatcgaggccatcagcaagaagtttgcgggctcaaatggtcagcctcaggccagcag
ttggctagtggtggaaatgataatctccttcatatatgggacagatccatggcgtcatca
aatgctcctacgcagtggcttcacaggctcgaggatcatacagctgctgttaaagcactg
gcatggtgtccgttccagggcaatctgcttgcatctggtggaggtggaggcgacaggtgc
ataaagttctggaacacacacactggtgcgtgcttgaactcggtggacacgggctcacag
gtttgcgctcttctgtggaacaaaaacgagcgtgaactgcttagttctcacggtttcact
cagaatcagctcactttgtggaagtatccttcaatggtgaaagtagcagagctcactggc
catacatctagagttctttacatggctcagagtccggatggatgcacagtcgcgtctgca
gcaggggacgaaactcttaggttctggaatgtttttgggaaacccgaagtagcaaaggcg
gcaccaaagactgctgcggagccgtttgctcacttgaatcgcatcagatag
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