Salvia miltiorrhiza (redroot sage): 131016541
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Entry
131016541 CDS
T09291
Name
(RefSeq) LIMR family protein At5g01460-like isoform X1
KO
K14617
LMBR1 domain-containing protein 1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
131016541
04980 Cobalamin transport and metabolism
131016541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
131016541
Membrane trafficking [BR:
smil04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
131016541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
131016541
NCBI-ProteinID:
XP_057801237
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Position
3:37125107..37130887
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AA seq
545 aa
AA seq
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MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDKNQAYFPKFVVVFGLTIAAISILML
PADVANRQACRHAIYNGACNLTLPMKDLWLAIYIVDAFLVFFVIPFAMFYYEGDQDKSVW
KRMRSALIWVVVTAIVCGLVLAIMYGLVGKVDFTVRHLSSTTMSFPSTWDFSNSQQCVGT
GARQCSAYSASASSESTWTMRTTFPEYVVALTTIVGSVLFTIFGGVGIACLPLGLIFSFV
RRPKAVITRSQYIKEATELAKKARELKKTADALHQEERSGGKGRKWRKNVKAVEKELLLL
EEDVKALEEMYPQGEKAEAMWAMTVLGYLAKLVLGVLGLIVSVAWIVHIVIYLLIDPPVS
AFLNEIFIKLDDVWGLLGTVAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN
SFLFNVALILLSSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIAF
IVLAGLTFVYYAAFVRSPPYPFTHFKICMNSNLLQRYVFSGMEKKKDYRSAPTLLISMLL
RLQLN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggggattttaatttagccctagtgatcgtggcgatagtcgtctgcgtgatcgttttc
ctagttaacgtctaccttctcgtcaactaccagcatcctgatgataagaaccaggcctac
ttccccaaattcgtcgtcgtcttcggccttacgatcgccgctatctcgattctcatgctt
ccggccgacgtcgctaaccggcaggcctgccgccacgcgatttacaatggggcttgtaac
ctgactctgccgatgaaggatttgtggctcgctatctacatcgtggatgcgtttctggtc
ttctttgttatcccgttcgccatgttttactacgagggcgaccaggacaagagtgtgtgg
aagagaatgagaagtgcactgatatgggtcgttgtgacagctattgtttgtgggctggtt
cttgcaattatgtatgggcttgtgggtaaggtggacttcactgttagacacctctcttca
actacaatgtccttcccatcgacatgggatttctccaacagtcaacaatgtgttgggact
ggagcaagacagtgctctgcgtattctgccagtgcttcatctgagtcaacttggaccatg
cggactacgtttcctgaatatgtagttgcacttactacaattgttggatcagtgctcttc
accatttttggaggtgttggcattgcttgcctgccactggggctcatattttcatttgtc
aggcgaccaaaggctgttatcacgcgctcacagtatatcaaggaagcaactgagctggca
aaaaaagcgagagaacttaaaaaaacagctgatgcacttcaccaggaagaaaggagtgga
ggcaagggaagaaagtggcgcaaaaatgtgaaagctgttgaaaaggagctacttcttttg
gaagaagacgtgaaggctttggaagagatgtatcctcaaggcgaaaaggctgaagcaatg
tgggctatgactgttctcggctaccttgccaaattggtgcttggagttctagggttgatt
gtttcagtggcttggattgttcatattgtgatatacttgctgattgaccctccagtttca
gcatttcttaatgagatattcattaagctggatgatgtttggggacttcttggcactgtt
gcatttgcatttttctgcttctaccttctgcttgctgtgattgctggagcaatgatgctt
ggtctgaaattggtttttattacaatccacccaatgaaatggggagctactcttatgaac
tcattcctttttaatgtggccctcattcttctttcctcaatcagtgtgattcagttctgt
gctactgcttttgggtattatgcccaagctactgcagctcaagaaatatttggtcacacc
ttgcaatcacttcgtggaatcaaatacttgtacaagtacaacgtgtttcaaatcgctttc
attgtcttagcagggctcacatttgtatattatgcagcattcgtacgttccccaccttat
ccatttactcattttaaaatatgtatgaactcaaatctgctacaacgttatgttttttca
gggatggagaagaaaaaagactaccggtcggctccaactctcctcataagcatgctgctt
cgacttcagctgaactga
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