Salvia miltiorrhiza (redroot sage): 131016728
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Entry
131016728 CDS
T09291
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131016728
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131016728
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131016728
NCBI-ProteinID:
XP_057801417
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Position
3:40884926..40889097
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AA seq
372 aa
AA seq
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MGNQHGRHSISGHRKNNHPPPLNYGPNPANSAPSTFGNPNMGLRLPYGHVDSSLRAVAGQ
AEGFGRFAVGGLNGAVYRVTTLADDGPGSLRDGCRKKEPLWIIFEVSGTIELSSYCNVSS
YKTVDGRGQRVKLTGKGLRLKDCEHVIICNLLFEGGRGHDVDGIQIKPNSKHIWIDRCSL
SDYDDGLIDITRQSTDITVSRCYFANHDKTMLIGADPSHTDDRCIRVTIHHCFFDGTRQR
QPRVRFGKVHLYNNYTRNWGIYAVCASVESQVYSQCNFYEAGQQKKVAFKYYTEKAADKS
EECSGCIRSDGDIFLGGTKSGLTPLPSETCVFHPSGFYDAWTVEPPTDELKHFLQHCTGW
QGIPRPADLPIS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcagcatgggcgtcactcaatctcgggccaccgcaagaacaatcatcctccg
ccgcttaattacggcccaaatcccgcaaattctgccccgtcaacattcgggaatccgaat
atgggtctgcgtttgccgtacggccacgtcgattccagtctgcgggcggtggctggacag
gccgagggcttcggccgtttcgccgtcggcggcctaaacggagccgtttaccgcgtcacc
accctcgctgatgatgggccaggctcactacgtgatggatgccgtaaaaaagagccttta
tggatcatctttgaagtttcgggaaccattgaactctcgtcttattgtaatgtgtcctcg
tataaaactgttgatgggcgtggtcaaagagttaaactcactgggaaaggcttgaggttg
aaggactgtgaacatgtaatcatttgcaatctcctatttgaagggggtagagggcatgat
gttgatgggattcagataaaacctaattcaaagcatatctggatagatcgttgcagtctc
agtgattatgatgatggactgattgatatcactcgacaaagcacagatattactgtttct
aggtgttactttgcaaatcatgacaaaaccatgctcattggtgccgatccatcccacacg
gacgacagatgcatacgagttaccattcatcattgcttcttcgatgggacacgacagcgg
cagccgcgtgtcagatttgggaaagtacatttgtataataattataccagaaactggggc
atttatgctgtgtgtgccagtgtagagtcacaggtctattcccaatgcaacttttatgaa
gctggccaacagaagaaggtggcctttaaatattacacggagaaggcagctgacaagagc
gaggaatgcagtggctgcatcagatccgatggtgatatattccttggcggaactaagtcg
ggtttgacgcccctcccaagtgaaacatgcgtttttcatccttccgggttctatgatgca
tggacagtggaaccaccaacagatgaactgaaacattttcttcaacactgcacgggatgg
caaggtatcccccgccctgctgatcttccgatttcttga
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