Salvia miltiorrhiza (redroot sage): 131017209
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Entry
131017209 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131017209 isoform X1
KO
K07573
exosome complex component CSL4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131017209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131017209
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131017209
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
131017209
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
131017209
NCBI-ProteinID:
XP_057801928
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All DBs
Position
3:5968798..5987336
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AA seq
198 aa
AA seq
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MKERVEENFVTPGDILGKALELKPGYGAYFSSHDKAIYASLTGFRSLTPAPPDSDDPRAT
VEVKGHKAHGPVPEPGVVVTARVTKVMAKIASADIVCVGPKSVREKFTGIIRQQDVRATE
IDKVEMHSSFRPGDIVKALVLSLGDARAYYLSTAKNELGVVSAESVAGATMVPISWTEMQ
CPLTGQTEQRKVAKVDVV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagagtagaagagaatttcgtgacgccgggtgatatactggggaaagctcta
gagttgaaacctggctacggcgcttacttctcgtcccacgataaagccatatacgcctct
ctcactggattccgctctctcactccagcccctcccgactccgacgatccgagggcgacg
gtggaggtgaagggtcacaaggcacacggtccggtgccggagcccggagttgttgttact
gcaagagttacgaaggtgatggctaaaatagcttccgcagatatagtatgtgtagggccc
aagtccgtacgagaaaaattcacgggcatcattaggcaacaagatgtcagagcgacggag
attgacaaagtagaaatgcactcctctttccgtcctggcgacatagtcaaggctttagtt
ctgtcccttggtgatgctcgagcttattatttgtcgactgcaaagaatgaactcggtgtg
gtttcagcagaaagtgttgctggtgcaacaatggttcctataagctggacagagatgcag
tgccctctaacaggtcaaactgagcagagaaaagttgcgaaggtcgacgtcgtctga
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