Salvia miltiorrhiza (redroot sage): 131017373
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Entry
131017373 CDS
T09291
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
131017373
03036 Chromosome and associated proteins [BR:
smil03036
]
131017373
Transcription factors [BR:
smil03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131017373
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131017373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
131017373
NCBI-ProteinID:
XP_057802085
LinkDB
All DBs
Position
3:8606639..8621644
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AA seq
1347 aa
AA seq
DB search
MVDEGEVEKKDEEIVDVEEEFSDNSAENNNDEAEEELEEESHSEEPLTEEEIEDLIAELL
EVESKAAEAQETLEEESLINVEADVRKELAQSLSGDELDKAVSGEMAAFREQWEVELDEL
ETESAHLLEQLDGAGIDLSSLYKWIEKQAPNGCCTVAWKNRTHWAGTHLSTDARESVTKA
EEFLQVHRPVRRRHGKVLEEGASGFLGKKVEKSESSEAVNDTTTVDWDSFSKICSDKSSL
EDITFGSKHWASVYLASTPQQAAELGLKFPGVDEVEEIDDVDGTSSDPFIADALANEGDL
NLTDEQKKNFKKVKEEDDANADRKLRSKLKRRRRRKQIKEDSTQGELSSSEGMRERPLDC
SMGKEDGTAEKDVGDQELNDSVNELSGIVHGERAKNNLEASSSVDVVELRGIKCSSECDE
QPDSKKFCTINLDSDGEGPDAGCKPLNMEEATKLDSQIISSSESDSDSDDSDADRSVNAS
TKRRRKKIIRRIIDDAELGEETKKKIAIEKERQERLKSLEARFSTKSPVMSSSVSNRSSF
DGTGLEILGDISSGYVVNVVREEGEEAVRIPPSISTKLKIHQVAGIRFMWENIIQSVRKV
RSGDKGLGCILAHTMGLGKTIQVIAFLYTAMRSVDLGLRTALIVTPVSVLHNWRHEFMKW
RPSELKPLRIFMVEDVPREKRVELFAKWRIKGGVFLIGYTAFRNMSLGKYAKDRDVAREI
SNALQEGPDILVCDEAHIIKNTRADTTQALKQVRCQRRIALTGSPLQNNLMEYYCMVDFV
REGFLGSSHEFRNRFQNPIENGQHTNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK
DLPPKTVFVISVKLSPLQRKLYKRFLDVHGFTKDKISGEKIIKRSFFAGYQALAQIWNHP
GILQLRKENKDSAKCEDVENLADDCSSDENIDYNLLPGEKLVNPQRKNYNGFLREDWWRD
LLMENSYKEPDQGGKMVLLLDILTMCSSMGDKALVFSQSILTLDLIEYYLSKMPRPRKNG
KCWKKGKDWYRLDGRTESSERQKLVERFNDPSNRRVKCTLISTRAGSLGINLHSANRVII
VDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHATMEEKIYKRQVTKEGLAARVVDRQQ
VHRTMSKEEILHLFDFGDDDIVPELGTEIGIAAEPNKTIRVGNLPKQKLPLGSSSSDRII
ESLISDHHPSWITNYHEHETLLQENEDEKLSKEEQDLAWEVYQKTLEWEEVRRVSPEEYI
PEQQTAQNPLIAEPAVDPPPIPTPKRDYALERARQRHQYRYGLRHCTNLAHLLTLRSQQI
KAGGHAICGECARVLHWEDLQPDPRCW
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgaaggagaggttgagaagaaggatgaagaaattgttgatgtagaggaagaa
ttttctgacaattcagctgaaaataataatgatgaagctgaagaagaactggaagaagaa
tctcattctgaggaacccttgactgaggaggagatagaggatctaattgccgagctttta
gaagttgagagtaaagctgcggaagcccaggaaacattggaagaggaatccttaatcaat
gtagaggctgatgttaggaaagaattggctcaatctctctctggtgatgagttggacaag
gctgtatctggagaaatggcagcattcagggaacagtgggaagtggaacttgatgagctt
gagactgaaagtgctcatttattggagcaactggatggtgctggtattgatctttccagt
ctctataagtggattgaaaagcaagctcccaatggttgttgcactgtagcatggaaaaat
aggactcactgggctggaactcatttgtccactgatgctcgtgaatcagttacaaaggct
gaagagtttctccaggtccacaggcctgttagaagacggcatggaaaagtcttggaggag
ggtgccagtggtttcctgggaaagaaagttgagaaaagtgaaagcagtgaagctgtaaat
gatactacgactgtagattgggattctttcagtaaaatctgctctgataagtcatctttg
gaagatataacttttggcagcaagcactgggcttctgtttacctggcaagcaccccacaa
caggctgcagaactgggtctgaaatttccaggtgttgacgaggtggaggagattgatgat
gttgatggtacgtcctctgatccatttatcgctgatgctttagcaaatgagggagatttg
aatcttactgatgaacaaaagaaaaactttaaaaaggttaaagaggaagacgatgcaaat
gctgatcgcaagcttcgtagtaaattgaaaagaaggaggcgtaggaagcaaatcaaagag
gattctactcaaggagaactttcctcatctgaaggcatgagagagcgcccactagattgt
tcgatgggtaaggaggatggaactgctgaaaaagatgttggagatcaagaactaaatgat
agtgtgaacgagttgtctggcattgttcacggagagagggcaaagaataatcttgaggcc
tcttcttctgtggatgtggttgagttgaggggcatcaaatgttcaagtgaatgtgatgaa
caaccagatagtaagaaattctgtacaattaatttggatagtgatggtgagggtccagat
gctggatgtaaaccattgaatatggaggaagccaccaaattagatagccaaattatctct
agttcagaatctgattcagattcagatgattcagatgctgacagaagtgtcaatgccagt
actaaaagaagacgtaaaaagataattcggaggatcattgatgatgctgaattgggagaa
gagactaagaagaaaattgcaattgagaaggagcgtcaagagcggcttaaatctttggag
gcacgattttctaccaaatctccagtcatgagttcttcagtcagtaacaggagctcattt
gatggcactggtttagaaatactgggcgacatatcttctggttacgtagtaaatgtggtc
agagaggaaggcgaagaggcagttagaattcctccaagcatctcaacgaaattaaaaatc
caccaggttgcaggaatccgattcatgtgggaaaatattattcaatctgtgagaaaagtg
aggtctggtgataaaggtcttggttgcattctggcgcatactatggggttaggtaaaaca
attcaggtcatagcctttctgtatactgctatgagaagtgtggacctaggactgagaact
gcgctcatagtaacaccagtaagtgttttacacaattggcggcatgagtttatgaagtgg
agaccatctgagctaaagcctcttcgtatcttcatggttgaagatgttccaagggaaaaa
agggttgagttgttcgcgaaatggagaattaaaggtggtgtcttcttgattggctatact
gcctttcggaatatgtctcttggaaagtacgctaaggaccgagatgtggctagagagatt
agtaatgcacttcaggagggacccgatattctggtctgtgatgaggcacacattatcaag
aacaccagggctgatacaacccaggcattgaaacaagtgaggtgccagaggagaatcgca
ttaactggatcgcctcttcagaacaatcttatggagtactattgtatggtcgattttgtt
agagaaggatttcttggtagcagccatgagttcaggaacagattccagaacccgatagaa
aatggtcaacacaccaattctactgcagaagatgtgaagataatgaatcaaagatctcac
attctatatgaacagttaaaaggatttgttcagaggatggacatgaatgtggttaaaaaa
gatttgccccctaaaactgtattcgttatctctgtgaaattatctccactgcagagaaaa
ttatataagagatttcttgatgttcatggattcacaaaggacaagatctcgggtgaaaag
ataattaagagatccttttttgcagggtatcaggccttagcccagatatggaaccatcct
ggaatattgcaactgaggaaagaaaacaaagattctgctaaatgtgaagatgtggagaat
cttgcagatgactgctctagtgatgagaacatcgactacaatttactccctggagagaag
ctcgttaatcctcagagaaagaattataatggattccttcgtgaggactggtggagagat
cttttgatggaaaatagctataaggagcccgatcaaggcggcaaaatggtcttgctactt
gatatcctcacaatgtgttcgagtatgggtgacaaggcactggtgttcagccagagtata
ttaacgttggacctaattgaatattatctttcaaaaatgccccgtccaaggaagaacgga
aaatgttggaaaaaggggaaggactggtacagattggacggaagaacagaaagctcggag
aggcagaagttggtcgagaggttcaacgacccatcaaacagaagggtgaaatgcactttg
atatcgactagagctgggtcgctggggattaatcttcattcagctaaccgagtaattata
gttgatggttcttggaacccaacgtatgatcttcaggctatatatagggcttggaggtat
gggcagaaaaagcctgtttttgcataccggttgctcgcacatgctacaatggaagagaag
atttataagcgtcaggtgactaaggaaggacttgcggcaagggtcgttgatcgacagcag
gtgcacagaacgatgtccaaagaagagatattgcatttgttcgactttggtgacgatgac
atagtgcccgagttgggaacagagatcggaattgctgccgagccaaataaaactattcgt
gtaggaaacttaccaaagcagaagctgccacttggaagttcatcttcggacaggataatc
gaaagcttgataagcgatcatcatcccagctggatcactaattaccacgagcacgagacc
ctgctgcaagaaaacgaagatgagaagctgtcgaaagaagagcaggatttggcttgggaa
gtgtatcagaagaccctcgagtgggaggaagtccgaagagtttctccggaagagtacata
cccgagcagcagaccgcacagaatccactcattgcagaacctgcagtcgaccctcccccc
ataccgactcctaaacgtgactatgcactcgaacgagccagacaacgccaccagtaccgt
tatgggctccgacactgcacaaacctcgcccacctgctgaccttgaggagtcagcagata
aaagcaggcggccacgccatatgcggggaatgcgctcgcgtgctgcattgggaggacctc
cagccagatccgaggtgttggtga
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