Salvia miltiorrhiza (redroot sage): 131017491
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Entry
131017491 CDS
T09291
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131017491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131017491
03036 Chromosome and associated proteins [BR:
smil03036
]
131017491
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131017491
Coactivators
SAGA/TFTC/STAGA complex
131017491
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131017491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
131017491
NCBI-ProteinID:
XP_057802221
LinkDB
All DBs
Position
3:complement(12809327..12818427)
Genome browser
AA seq
979 aa
AA seq
DB search
MDPNIMKFLEEDEDETMHSGADVEAFTAELNRDIEGNNSIQEDSFDSNAAALSQGSSHMT
GQFLPQWHTSHNDGIANFQSGQDITTVGEKDQHSSELELHRHDSDSQNRKEDDSSSHEPN
PNQQDDQNTFPLPQTVSGQPSGEHPITAQVLDHEAKPDKELQMNKLQNISQHPSMAVGSN
DQQPLSMEFSDQQILPAGKGNSQTSMGVNNDQVMPPLNQQTTGMPITSQQAITSGMSNPQ
TMTSSSQQSVTALKLNKQVPFGMLLPIIQPQLDKDRAMQLHTLYFKLKRNEISKDGFVRH
MRSIVGDQMLKMAVYKLQTQAVRNSQASQAAPNQFQSQPQASGRQMPSAQLPTDLSNSIS
DNNAAKSREVERQADSHGAQVGQMSTTVSGALSHERKHPAFPAQGLNKQQHMQFSQTSFP
TYGGAGSGYPPFPPTSAASSAPIRPQSHDSQMRQAPSHPNITANHLGPTSRPMNVTNTST
FDSPHSLTDPKKIPAGSLTHMNSNPMLQQSQVQWPSSTSKEQKTSISSSAGHVKQEPSDQ
LNEQHKSQLSASHGLSSLTPGPSKLGSAASGNMNLKDESFEMQSSRTGLTAPATLVPSNS
VSSPSPSMTETNIMSNSRMPSLTTPVGPGNNSKAPPKKPLVGQKKPMEAPGSSPPSSKKQ
KVSGSFVDQSIEHLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRVVQEEEEKLILQ
KIPLQKMMAVIMAKCGLKNMSNDVERCLSLCVEERMRGLISNIIRLSKQRVDVEKPRHKT
IITSDVRQQIMAINSKAREDWEKKQAETEKSQKLSESESSTGADADKEKDENRGKSVKVN
KEEDDKMRATAANVAVRAATGVGDITSRWQLMIEAKQKQGGTDISSGPQTNKDVGRKPLA
TSTRNTRENQESEKRDSSVALTTPASIRKVGRNQVVVPRVARSISVKDVIALLEREPQMS
KSTLLYRLYHKVSTDAVSE
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggacccaaacatcatgaaattccttgaagaagacgaggatgaaactatgcattcgggc
gcagacgtggaggccttcacagcagaattgaacagagacattgaagggaataattcgata
caggaggattcctttgattccaatgccgcagccttgtctcaaggaagcagtcatatgaca
ggtcagtttcttccacagtggcacacgtcccataatgatgggattgctaatttccaaagt
gggcaagatattacgaccgtgggggaaaaagaccagcattcttctgaattggagttgcat
agacatgactcagactctcagaataggaaagaggacgatagctcctcccatgagccaaac
cccaaccagcaggatgatcagaacaccttccccttaccccaaacagtgagcgggcaacca
tccggagaacatcccatcactgcacaagtgctggatcacgaagcaaagccagataaagaa
ttgcagatgaacaaattacaaaatattagccaacatccgtcaatggcagtggggtcaaat
gaccaacagcccctgtcaatggaatttagtgatcaacagattttgccagcaggtaaagga
aattcacagacaagtatgggagtgaataatgaccaagtcatgcctccattgaatcagcaa
actacaggaatgccaattactagccaacaagcaattacctcagggatgagtaatccacag
accatgacgagcagtagtcaacagtctgttaccgcgttgaaattgaacaaacaagttccc
tttggcatgttgcttcctatcatacaacctcaacttgataaggacagagctatgcaactt
cacactctttactttaaactgaagagaaatgagatttctaaagatggatttgtccggcat
atgagaagtattgttggagaccagatgttaaaaatggcagtgtacaaactgcagactcag
gctgttaggaactcacaagcttctcaagctgctcccaatcaatttcaatcgcagcctcag
gcttctggacggcagatgccttcagcacaactgccaacagatttgagcaattcaataagt
gacaataatgcagcaaaatcacgtgaggtggagaggcaagcagattcacatggagcacaa
gtaggccagatgtcaactaccgtttcaggtgctttaagtcatgagaggaagcatcctgca
tttccagcacaggggcttaataagcagcagcatatgcaattctcacagacatcctttcca
acatatggaggtgctgggagtggttacccgcctttcccgccaactagtgctgcttcttcc
gcacctatccgaccacagtcgcatgattctcagatgaggcaggctccatctcatccaaat
atcactgctaatcacttggggccaacatcccggcccatgaatgtgacgaacacgtctaca
tttgatagccctcattcgcttactgatccaaagaaaattccagctggaagtttgactcac
atgaatagcaacccaatgctacaacaaagtcaagtccagtggccatcatccaccagcaaa
gagcagaaaacttctatttcatcatctgctggtcatgttaagcaggaaccatcggatcag
ttaaatgaacaacacaaatcccagttgtctgcctcacatggattatcttctttgactcct
ggacctagtaaactgggcagtgctgcttctgggaatatgaatctgaaggatgaatctttt
gagatgcagtcatcaagaacaggactcacagcacccgcaactctggtgccatcaaactca
gtttcctctccaagtcccagcatgacggagaccaatattatgtcaaactctcggatgcct
tctctaacaactcctgttggtcctggaaataattccaaggctcccccaaaaaagcctctg
gttggccagaagaagccaatggaagctcctggttcctcacctccatcaagtaagaagcaa
aaagtgtctgggtcctttgttgatcaaagcatcgagcatctcaatgatgtgactgcagtg
agcggagttaatctcagggaggaggaggaacaactattttctggatccaaggaagacagc
cgtgtttcagaggcatctcgacgggttgttcaagaagaagaagagaaattgatactgcag
aagatcccacttcagaaaatgatggcggtgataatggcaaaatgtggtttaaagaatatg
agtaatgacgtggagcgatgcttgtccttgtgcgtagaagagagaatgcgtggactcata
tctaatataatcagactttcaaaacagcgagtggatgtggaaaagccaaggcacaagacc
attatcacttccgatgttcgacaacagattatggccataaattccaaagctcgtgaagat
tgggagaaaaagcaggctgaaactgaaaagtcccagaaactgagtgaatctgaaagcagt
acaggagctgatgctgataaggagaaggatgaaaatcgtggaaaatcagtgaaggttaac
aaagaggaagatgataaaatgcgtgcgacagctgcaaatgttgctgttcgagctgctact
ggagtgggtgatattacatcaagatggcaattaatgatcgaggccaagcagaaacaggga
ggaactgacatatcatctggtcctcagactaacaaagacgtgggacgaaagcctttagca
acctctacaagaaacacaagggaaaatcaagaatccgaaaagcgggattcttctgttgct
cttacaactcctgcatcgatcagaaaagtgggacgaaatcaagttgttgtaccacgggtg
gctcggagcatttcagtgaaggatgtgattgcattattagaaagagagcctcaaatgtcg
aaatccacactgctctaccgcttatatcacaaggttagcactgatgctgtcagcgaataa
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