Salvia miltiorrhiza (redroot sage): 131017887
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Entry
131017887 CDS
T09291
Name
(RefSeq) high mobility group B protein 13-like
KO
K09273
upstream-binding transcription factor
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
131017887
03021 Transcription machinery [BR:
smil03021
]
131017887
Transcription factors [BR:
smil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
131017887
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
131017887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
KRAB
Motif
Other DBs
NCBI-GeneID:
131017887
NCBI-ProteinID:
XP_057802606
LinkDB
All DBs
Position
3:16782765..16785073
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AA seq
494 aa
AA seq
DB search
MAAVAENPTIADPAPAKRGRTKKALKPKTITSSEVNIAAGEIPEPSPVAAPPPENSAGKE
NHESLSRKKTKKGAAKGKQPASDASSFEKQLQEMQEQLEKLKIEKEQTEEMLKAKEEQLE
TRDREQEKLKIELKKLQKIKEFKPTVTFPLGLGIKDLEQEKKEKKKGGTKKPSPPYVLWC
KDQWNEVKKSNPDTDFKEMSNLLGAKWKSITVEEKKPYEERYQAEKEAYLKIAGNEKREL
EAMKLLEDEQKQKTAIELLEQYLQFKQEAEKENNKKTKKEKDPLKPKQPMSAYFIFSNER
RAALLAENKNVLEVAKITGEEWKKMTDEQKTPYEEIALKNKEQYMQEMELYKQRKEEEAA
NLKKDGEEFMKLQKQEAMQLLKKKEKTETLIKKNKENRQKKKNEEKIVDPNKPKRPASSF
LLFSKETRKSLVEERPGVNNSTITALISLKWKEISEEEKQVWNEKAAEAMEAYKKELETY
NKNLAAAEEAQKQG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtagcagaaaaccctacaatcgccgacccagcgcccgcgaagagagggaga
acaaaaaaagcgctgaagccgaaaactatcacgtcaagtgaggtcaacatcgccgccggg
gagattccggagccctctcctgtcgccgctccgccgccggaaaactccgccgggaaagag
aaccacgagagcctgtctcggaaaaaaacgaagaaaggggcggcgaaggggaagcaaccg
gcgtccgacgcgtcttccttcgagaaacagctgcaggaaatgcaggagcaactcgagaag
ttgaagatcgagaaggagcagaccgaggaaatgttgaaggccaaggaggaacaactcgag
actcgtgatcgcgagcaagagaaactcaaaatcgaattgaagaaattgcagaagatcaag
gagttcaaacccactgtgacattccctctagggctcggaatcaaagatctagagcaagag
aagaaggagaagaagaagggagggacgaagaagccatctcctccttacgtgctgtggtgc
aaagaccagtggaatgaggtgaagaaatctaatccagataccgatttcaaggagatgtcg
aacctgttgggggcaaaatggaaatccatcaccgtggaagagaagaagccttatgaagag
aggtaccaagcagagaaggaagcctatttgaagattgcaggaaacgagaagcgcgagctc
gaggcgatgaagcttcttgaagacgagcagaagcagaagactgcaatcgagttgctcgaa
cagtaccttcagtttaagcaggaggcagagaaggaaaacaacaagaaaacaaagaaggag
aaagaccctttgaagccgaagcagccgatgtcggcctacttcatcttctccaatgagcgc
agagctgctctgcttgcagaaaacaagaatgtcttggaggttgcaaagatcacaggtgag
gagtggaagaagatgacagatgaacaaaaaaccccctatgaagagatagcattgaaaaac
aaagaacaatatatgcaagagatggaattgtacaagcagaggaaggaagaagaagctgct
aacctcaagaaagatggggaagagttcatgaaactccagaagcaagaagctatgcaactg
cttaaaaagaaagagaaaactgaaactctaatcaagaaaaacaaagagaatcgccagaag
aagaagaatgaagagaagattgttgatccgaacaaaccaaagcggcctgcctcgtctttc
cttctcttcagcaaggagacgaggaagagtttggtggaagagcgccccggtgtcaacaac
tctacgatcactgcactcatttcgctcaagtggaaggaaataagtgaggaagagaagcag
gtttggaatgagaaagctgcggaagcaatggaggcgtataagaaagaactggaaacatac
aacaagaatttggcagcagcagaagaggcccaaaaacaaggatga
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