Salvia miltiorrhiza (redroot sage): 131018506
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Entry
131018506 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: beta-xylosidase/alpha-L-arabinofuranosidase 2-like
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00520
Amino sugar and nucleotide sugar metabolism
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
131018506
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
131018506
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GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
131018506
NCBI-ProteinID:
XP_057803210
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Position
1:28731751..28735693
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AA seq
781 aa
AA seq
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MPSSIYPSRGSITMASARHSVFPCFAALCTILLCLRPVVGQAEPVFACDVERNPALKNLS
FCDSSLDVQARVSDLVSRLTLQEKIGWLVNGAKGVSRLGIPNYEWWSEALHGVSNVGPGS
KFTSLVPGATSFPQVILTAATFNEALFETIGKVVSTEARAMYNVGLAGLTFWSPNVNIFR
DPRWGRGQETPGEDPVLTSKYGAAYVRGLQQSDDADKDKLKVAACCKHYTAYDVDNWKGI
QRYSFNALVTQQDMDDTFQPPFKSCVIDGNVASVMCSYNQVNGKPTCGDPDLLAGVIRGQ
WKLNGYIVSDCDSLNEMFYTQKYTKTPEETAALAVNSGLDLNCGTFLSSNAQKAVDTGLL
NETTIDKAVSNNFATMMRLGFFDGNPSNQLYGKLGPKDVCTSENQNLAREVAREGIVLLK
NSAGSLPLSSASIKSLAVIGPNANATHTMLGNYEGIPCKYTTPLLGLTASVATVYQPGCA
DTSCASAQVDAAKTAAAAADAVVLVMGSDQSIERESLDRLNITLPGQQQLLVSEVASVSK
GPVILVIMSGGGMDVQFAKDDPKITSILWVGFPGEAGGAAIADVIFGAYNPSGRLPMTWY
PESYADTVDMTDMHMRPNPDTGYPGRTYRFYKGPTVFSFGDGLSYTAFKHELVAAPKLVS
VALEEGHACRSSECKSIDAVEDSCKNLGLNIHLRVKNEGEMRGSHTVFLFSSPPQLHNAP
QKQLLGFQKLHLEAGGEGLARFDIDVCKHLSVVDENGKRKVGLGDHLLHVGSLKHSLTIR
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaagcatttatccatcacgggggagcattacaatggcctctgcaaggcactct
gttttcccctgtttcgcggccctctgcacaatcctcctctgtttgaggcccgttgttggt
caagctgagcccgttttcgcctgcgatgtggagagaaatcccgcgctgaagaacctgagc
ttctgcgactcgtcattggacgtgcaagcccgggttagcgacctcgtgagcaggcttacg
ctgcaggagaaaatcgggtggctggtgaatggtgccaagggagttagccggctcgggata
cccaactacgagtggtggtcggaggcgttgcacggcgtctccaatgtcgggccgggctcc
aagttcaccagcctcgtcccaggcgccactagcttccctcaggtcatcctcaccgccgcc
acattcaatgaagctctgtttgagaccattgggaaggtggtgtcgacggaagcaagagca
atgtacaatgtggggctagccgggctgacgttctggtcgcctaacgtgaacatcttccgc
gaccccagatggggtcgcgggcaggaaactccgggggaagaccccgtcctcaccagcaaa
tacggggctgcctatgtgagaggcctgcagcagagcgatgatgccgataaggacaagctc
aaggttgctgcttgctgcaagcattacacggcttatgatgttgataattggaaagggata
cagagatacagtttcaacgctctggtgacgcagcaggatatggatgacacgttccagccg
ccgttcaagagctgtgttatcgacgggaacgtggcgagcgtgatgtgctcttacaatcaa
gtcaatggcaaacccacttgcggagaccctgacctcttggctggtgtgattcgaggccag
tggaagttgaatggctacatcgtttcagattgtgattcgctaaacgagatgttctacacg
caaaaatacactaaaacgcccgaagaaacggctgccttggctgtgaattcagggttggat
ctcaactgtggtactttccttagcagcaacgctcaaaaggcagtggacaccggccttctc
aacgagacaacaatcgacaaggccgtctcaaacaatttcgcaaccatgatgaggttggga
ttcttcgatggtaaccccagcaaccaactctacggcaagctcgggcctaaagatgtgtgc
acttcggaaaaccagaatcttgctcgtgaggtcgcgcgagaaggcatcgtgctgctcaag
aactccgcaggctcgttgcctctatcctctgcatccatcaagtcgttggcagttattggc
ccaaatgctaacgccacacacaccatgttaggcaactatgaaggcattccgtgcaaatat
acgaccccattgctgggactgacagcctccgtagctacagtgtatcagcccggctgtgct
gacacgtcgtgcgctagcgcccaagtggacgccgccaagacagcggccgcagccgctgat
gctgtggtgcttgtgatggggtcggatcagtcaatcgagagggagagcctcgacagattg
aacatcactctccccggacagcagcagctcttggtatccgaggttgcgagtgtttcaaag
gggcctgtgatccttgtcataatgtcgggtggagggatggatgtgcagtttgccaaagac
gaccccaagatcaccagtatcctctgggtcggcttccccggggaggccggcggggctgcc
atcgccgatgtcatattcggcgcctacaaccccagtgggagactacctatgacatggtat
ccggaatcgtatgccgacacggttgatatgacggatatgcacatgaggcccaatccagac
acgggttaccctggccggacttaccggttttacaagggtccgacggttttttcattcgga
gatgggctgagttacaccgccttcaagcatgagttagttgcggcgcctaagctcgtgtct
gtggctctagaggaagggcatgcttgtcgatcatcggagtgcaagtccatcgatgctgtg
gaggatagctgcaagaatttgggactgaatattcatctgagagtgaagaatgaaggggag
atgagagggagtcacacggttttcttgttttctagccctccgcagctgcacaatgcgccg
cagaaacaactgttgggatttcagaagctgcatctggaggcagggggagaagggctagct
cgattcgacatcgatgtttgtaagcatttgagcgttgtggatgagaatgggaagaggaag
gttgggttgggagatcatcttcttcatgtggggagcttgaagcattcgttgactatcagg
atttga
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