Salvia miltiorrhiza (redroot sage): 131018845
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Entry
131018845 CDS
T09291
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
smil03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131018845
03083 Polycomb repressive complex
131018845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
131018845
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131018845
Histone modification proteins
HAT complexes
HATB complex
131018845
HDAC complexes
Sin3A-HDAC complex
131018845
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131018845
PRC2.2
131018845
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131018845
Heterochromatin formation proteins
Other heterochromatin formation proteins
131018845
Chromatin remodeling factors
NuRD complex
131018845
NuRF complex
131018845
NuRF complex (fruit fly)
131018845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_WDR19_1st
MIOS_WD40
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
131018845
NCBI-ProteinID:
XP_057803530
LinkDB
All DBs
Position
1:29593194..29595995
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AA seq
424 aa
AA seq
DB search
MEKDDDEMRGEIEERLVNEEYKIWKKNTPFLYDLVVTHALEWPSLTVEWLPDREEPPGKD
YSAQKMILGTHTSENEPNYLMLARIQLPLEDTENDSRHYDDERSEFGGFGCTNGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTE
GYGLSWSQFKDGHLLSGSDDAQICLWDINATPKNNALDAMQTFKIHEGVVEDVAWHLRHE
YLFGSVGDDQHLHIWDLRSPSVNKPIQSVVAHQSEVNCLAFNPFNEWVLATGSTDKTVKL
FDMRRISTALHKFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRINEEQSSEDAE
DGPPELVFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMSENIYHDEDDVPVNDA
MKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagacgacgacgagatgaggggggagattgaggagcggctggtaaatgaggag
tacaagatttggaagaagaacacgccgttcctctacgatttggtcgtcactcacgcgctc
gagtggccgtcgctgaccgtggagtggctgcccgaccgggaggagccgccgggcaaggat
tactctgcccagaagatgattctcggtacccacacttccgagaacgagcccaattacctc
atgctcgccaggattcagctgcctctcgaggacaccgagaacgattcccgccattacgac
gatgaacggtctgaattcggtggatttggctgcactaatggcaaggttcaaattatccag
caaataaatcatgatggggaggtcaatcgagcccgttacatgccccaaaatccatttatt
atcgccaccaagactgttagtgcggaagtttatgttttcgactatagcaaacatccctca
aagcctcctctagatggtgcatgtaaccctgatttgaggctaaggggccacagcactgaa
gggtatggtttatcgtggagtcagttcaaggatggtcatcttttgagtggttcggatgat
gcccaaatatgtttgtgggatataaatgcaactccgaagaataatgctctagatgcaatg
caaacatttaagattcatgaaggtgttgttgaagatgtggcatggcacctcaggcatgaa
tatctgtttgggtcggttggagatgaccagcatcttcatatatgggatctccgatctcct
tcagtcaacaagccgatacaatctgtagtagcccatcaaagcgaggtaaactgtttggct
ttcaatccttttaatgagtgggttctggcaacgggttccactgacaagactgtcaagtta
tttgacatgcgaaggatttctaccgcactccacaaatttgactgtcacaaggaggaggtt
ttccaggtcggatggaacccaaagaacgagaccatcttagcttcgtgttgtcttggtaga
agactgatggtctgggatctcagcaggattaatgaagagcagtcgtcggaggatgctgag
gatggaccaccggagctcgtattcattcatggtggccatacgagtaaaatctccgacttc
tcatggaacccttgtgaagactgggttgttgctagcgtggcggaggacaacatacttcaa
atatggcagatgtctgagaacatctaccatgatgaagatgatgtgcctgtgaatgacgcc
atgaaaggctcctag
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