Salvia miltiorrhiza (redroot sage): 131019009
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Entry
131019009 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
131019009
03036 Chromosome and associated proteins [BR:
smil03036
]
131019009
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131019009
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Helicases
131019009
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
131019009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
FlpD
Motif
Other DBs
NCBI-GeneID:
131019009
NCBI-ProteinID:
XP_057803677
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All DBs
Position
3:54565047..54570287
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AA seq
647 aa
AA seq
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MEKAELPEFLHDDEEEERNQLNSEMGEPMNXNQEEKMRFDKNNEDEGDPNALSKFRISKA
LRETLKEKGIESLFPIQAMTFNTILDGSDLVGRARTGQGKTLAFMLPILESLTNGPAKSS
RKTGYGRAPSVLVLLPTRELATQVFSDFEIYGGSLGLKCCCLYGGSPYQPQQIQLKRGVD
IVVGTPGRIKDHIDRGTIDLSALKFRVLDEADEMLRMGFVEDVELILGKVEDASRVQTLL
FSATLPEWVKHIAAQFLKRDKKTTDLVGNEKMKASTNVRHIVLPCSSSARSQIIPDIIRC
YSSGGRTIIFTETKDSASTLAGLLPGARALHGDIQQATREVTLSGFRSGKFSTLVATNVA
ARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKTGIAVMLYDPRKSNFSKIERESGV
KFEHMSAPQPADIAKVAGAEAAEKIAEISDRVIPVFKAAAEELVKSSVLSPAELLAKALA
KIAGYTEIKSRSLLTSMENYVTILLECGRPIYTPSFVYGVLRRFLPEEKVESIRGLSLTT
DGKGAVFDVATEDLDQFIAGQKNLSGVSLEVVKSLPRLQEREQARGGGRFGGGGRGGGFP
ERRDGRLSGGRGGRGGFPDRRNDRFSRGGGGGGGGGGRGRGNNNRRW
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggctgaacttccggaatttttgcatgatgatgaagaggaggagaggaaccaa
ctcaattccgagatgggcgagcccatgaatntcaatcaagaagaaaagatgaggttcgac
aaaaataacgaggatgagggagaccctaatgcgctgtcgaaattccggatttcgaaggcg
ttgagggagaccctcaaggagaagggaattgagtcgctgtttccaattcaggccatgacc
ttcaataccattctcgatggttctgatttggtcggaagggcgcgcactggtcagggtaaa
acattggcttttatgttgcccatattggaatcattgacgaatgggcctgcaaaatcatca
aggaagactggatatggaagggcaccaagtgttctagtgcttttacccactagagaactg
gccactcaggtgttttctgactttgagatatacggtggatcattagggttgaaatgttgt
tgtttgtatgggggttcgccataccagccacaacagattcaattgaaaagaggcgttgac
atcgttgttggtactcctggtcgcattaaggatcacatagacagaggaacaattgacttg
agtgcattaaagttccgagtacttgatgaggctgatgaaatgctgaggatgggttttgtt
gaagatgttgaacttatcttgggcaaggtagaggatgcaagtagagtccaaacacttctt
tttagtgctactttaccagaatgggtgaagcatattgcagcacaatttctaaaacgagat
aagaaaactactgatcttgttggaaatgagaagatgaaggctagcacaaatgtgagacat
attgttcttccctgctctagttctgccagatcccaaattattcccgatattattcgctgc
tatagtagtggaggccgcactattatttttactgagacaaaggattctgcttccacacta
gctggattactacctggagcacgagctttgcatggggacatacaacaggctacacgtgag
gtcacactttctggattcagatccgggaaattttcgacacttgtggctacaaatgtagcg
gcacgtgggttagatattgatgatgtccagctaattattcagtgcgagccacctcgtgat
gtggaggcatacattcatcgctctggaagaacaggaagagcagggaaaactggcattgct
gtaatgctttatgatccaaggaagtcaaacttttctaagatagaaagagaatctggggtg
aaatttgaacatatgtcagctccacagccagcagatattgctaaagttgctggtgcagag
gctgctgagaaaatagctgagatatctgatagagtcatacctgtatttaaggctgctgct
gaagagctagtgaagtcatctgttctgtccccagcagaattgcttgcaaaggcactggcg
aaaattgctggttatactgaaatcaagagtcgatcacttctcacttcaatggaaaactat
gttaccattctccttgagtgtggacggcccatttacacaccttcatttgtgtacggtgtc
ctacggagatttttacctgaagagaaagtggaatcaatcaggggcctttctttgaccact
gacgggaagggtgcagtgtttgatgtggctactgaagatttggaccagtttattgccggg
cagaaaaatctctctggggtaagtctagaggtggtgaaatcattgccacgattgcaagaa
agagagcaggcaagaggagggggcagatttggaggtggagggcgtggtggtggtttcccg
gagagaagagacggtaggttatccggtggaagaggtgggagagggggatttcctgatcgg
agaaatgatagattctctagaggtggtggtggtggtggtggtggtggtggaagaggtcgt
ggaaataacaaccgcagatggtga
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