Salvia miltiorrhiza (redroot sage): 131019382
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Entry
131019382 CDS
T09291
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
smil03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131019382
03083 Polycomb repressive complex
131019382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
131019382
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131019382
Histone modification proteins
HAT complexes
HATB complex
131019382
HDAC complexes
Sin3A-HDAC complex
131019382
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131019382
PRC2.2
131019382
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131019382
Heterochromatin formation proteins
Other heterochromatin formation proteins
131019382
Chromatin remodeling factors
NuRD complex
131019382
NuRF complex
131019382
NuRF complex (fruit fly)
131019382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
MIOS_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
131019382
NCBI-ProteinID:
XP_057803907
LinkDB
All DBs
Position
4:complement(21480745..21484878)
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDEDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRLEPPGKD
YSVQKMILGTHTSENEPNYLMLAQAQLPLEDAENDARQYDDERSEFGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIFKIHEGVVEDVAWHLRHE
YLFGSVGDDQYLHVWDLRNPSMSKPVQSVVAHQSEVNCLAFNPFNEWVLATGSTDKTVKL
FDMRKLSTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPGEDS
TKPS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaggacgaaatgcggggcgaaatcgaggagcgcctcatcaacgaggag
tacaagatttggaagaagaacaccccctttctctacgatctggtaatcacccacgccctc
gagtggccctccctcaccgtcgagtggctgcccgaccgcctcgagcctcccggtaaggat
tactccgtccagaagatgatcctcggcacccacacctccgagaatgagcccaattacttg
atgctcgcgcaggctcagctccccctcgaggacgccgagaatgatgctcgccagtacgac
gacgagcgctccgaattcggcggcttcggctgcgctaatggcaaggtgcaaattatccag
caaattaatcatgatggggaggtgaatcgtgctcgctatatgcctcaaaacccgtttatt
attgccactaagactgtcagtgcagaagtttatgtcttcgattatagcaagcatccatct
aaacctcccttggatggtgcgtgcaaccctgatttgaggctcaggggccatagtacagaa
ggatatggtttatcatggagccagttcaagcagggtcatttgttgagtggttcagatgat
gcccaaatatgtttatgggatataaatgcgactccaaagaataaggctttagatgccatg
caaatttttaagattcatgaaggtgttgttgaagatgtagcatggcatctgaggcatgaa
tacttgtttggatctgttggagacgatcagtatttgcatgtatgggatctccgtaatcca
tcaatgagcaagcctgtacaatctgtagttgctcatcagagtgaggtaaactgtttagcc
ttcaatccatttaacgagtgggttttagcaaccggatctactgacaagactgttaaatta
tttgatatgcgaaagctttctactgccctccacacctttgattgccacaaggaggaggtt
ttccaggtcggatggaatccaaaaaatgagaccatcttagcttcgtgttgtcttggtagg
agattaatggtctgggatcttagcaggattgacgaagaacaaacaccagaggatgcggag
gatgggccgccagagctattgttcattcacggcggccatacaagcaagatatcggacttt
tcatggaacccttgtgaggattgggtagtagcgagtgtggccgaagataacatactacaa
atttggcagatggcagagaacatctaccacgacgaagatgatctgcctggagaagattct
accaagccttcctag
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