Salvia miltiorrhiza (redroot sage): 131019434
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Entry
131019434 CDS
T09291
Name
(RefSeq) protein RAE1-like isoform X1
KO
K14298
mRNA export factor
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131019434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131019434
03036 Chromosome and associated proteins [BR:
smil03036
]
131019434
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131019434
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131019434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
131019434
NCBI-ProteinID:
XP_057803957
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Position
4:complement(22626228..22632741)
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AA seq
365 aa
AA seq
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MATFGASTTNANPNRSTEVLSPPSDSVSSLCFSSKANHLVATSWDNQVRCWEVMKSGTTV
NTVPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKELA
WIPEMSLLVTGSWDKTLRYWDLRQQNPTWVQQLPERCYALTVKHPLMVVGTADRNLVVFN
LQNPQTEFKRVVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDAQSSKNFTFKCHR
DGNDIYSVNSLNFHPVHQTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSTFNHDGS
IFAYSVCYDWSKGAENHNPSAAKTNIYLHLPQVQFMISNLCFGFSSLILMSPVLKMNIVS
FVAGG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggctacattcggcgcttcaacgactaacgccaatcctaatcgttcgactgaggtgttg
tcacctccgagtgattcagtttcgagcctgtgttttagttctaaggccaatcatttggtc
gctacgtcgtgggataatcaggtacgatgttgggaggtgatgaaatcaggaaccactgtg
aacactgtacctaaggcttcaatatcacatgatcaaccggtcttatgctcagcttggaag
gatgatggaacaactgtattttctggtggctgtgacaaacaagtcaagatgtggccatta
ttatctggtggccaacctgttactgtagccatgcatgatgctcctgttaaagagcttgct
tggatcccagaaatgagtctcttagtcacaggaagctgggataagacacttaggtattgg
gatctgagacagcagaatccaacttgggtgcagcagcttcctgaacgctgctatgcgctt
actgttaaacatcctcttatggttgttggcactgcagatagaaatcttgtagttttcaac
ctgcagaaccctcagacagagttcaagagagtcgtgtcaccattgaagtaccagactagg
tgtttagctgcattcccagatcagcaaggcttcttagttggctcaattgaaggcagagtt
ggggtacaccaccttgatgatgcacaatcaagtaaaaattttactttcaaatgtcacaga
gatggcaatgacatttactctgtcaactcactgaattttcatcctgtacaccagacattt
gcaactgctggatccgatggtgcctttaacttttgggacaaagatagcaaacagaggctt
aaggctatgctgaggtgcagtcagccaataccttgcagcactttcaaccatgacggatca
atatttgcatactcggtttgttacgactggagcaaaggtgctgaaaatcacaatccatca
gcagcaaagaccaatatttacctacatctgccccaggtgcagttcatgatttcgaactta
tgttttggtttctcttctctcattctcatgagtccagtgcttaaaatgaacattgtatct
ttcgtcgcaggaggctga
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integrated database retrieval system