Salvia miltiorrhiza (redroot sage): 131019576
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Entry
131019576 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131019576
KO
K14315
nucleoporin NDC1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131019576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131019576
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131019576
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
131019576
NCBI-ProteinID:
XP_057804133
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All DBs
Position
4:complement(27936161..27939697)
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AA seq
559 aa
AA seq
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MSISAAIHRSLFKDKDGGGGARALSAIIKHRFLSFLIWQSLQSTLLLFLSKTLLLSLFTK
YPFSPIFQSLVYFVCFHVSLLIVSVSLFFISSAHPLPFASPLEISLSFIRLIFVSGGEQS
LLRTRVRVSLTFVLFVCLCAVSGAVSAISVCWGCDVYYYFDSGSSRVGALGFRGFVIGLF
YGLHYVYKQRWVFRFPIIQRPPFFSYKMGLPLSIGRALRFSAVGFALSGMLSFFLPNEYK
SQSSVGKFIVEQIVFYLGSFVVILCWELSHHLHQVLHTKRFVFAPPKGSAAAETNPSEPL
LATIEESTPNSLLQYLAYLDLCMVCENNVDSWRRAAFFEETGETYRRVIAACLRPLEQFT
QKLAEGLECSSAEKSMQLSDQLTSPTERLAVLKLYESFFDAQLCAWCARVVASLTSRSRK
EDKFGVAQLSGSNAAVISTLLSSLLAVETLMGKKTNVQSAHLMGPAGIKWATVNTGRRES
TAGAMGKIRGSPLYAKAYSMADILKTSIYCIASAFHNEMLNSGKAGLLEKDWIISSKPLY
GTHELLLHKLRLFLDYQAN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctccgccgccatccaccgcagtctgttcaaagacaaggacggcggcggcgga
gctcgagctctctccgccatcatcaagcaccggttcctcagtttcttaatctggcaatcc
ctccaatcaaccctcctactctttctctccaaaacccttcttctttccctctttactaaa
taccccttttctcccatttttcaatccctagtctacttcgtctgcttccacgtctcgctc
ctcatcgtctctgtctctctcttcttcatctcttccgcgcatcctctgccgttcgcctcc
cctctcgaaatctccctttcgtttattcgcctgatatttgtttctggaggtgagcagagc
ttgttgaggacgagggtcagagtgtcgttgaccttcgtgctgtttgtgtgcctttgtgct
gtgtccggcgcggtttcggcgatttctgtgtgctggggttgtgatgtgtattattatttt
gattcgggttcgagtagggttggtgctttggggtttaggggtttcgtgatcggcttgttt
tatggcttgcattatgtgtataagcaacggtgggttttcaggtttccgataattcagcgc
cctccgttcttcagctacaaaatggggcttccgttgtctattggacgggcgttaaggttt
tctgctgttggctttgcactatcagggatgctatcttttttcctgcctaatgaatacaaa
agtcaaagttctgttggaaagttcattgtcgagcagattgttttctaccttgggagtttt
gtagtaattctttgctgggaactaagccaccatctgcatcaggttctacataccaagaga
tttgtatttgcacccccaaaaggatcagcagcagcagaaacaaatccaagtgagccactc
ctggccacaattgaagaaagcaccccaaattcacttttgcagtatcttgcttatctcgat
ctctgcatggtgtgtgaaaataatgttgattcatggcgccgagctgccttctttgaggag
actggcgagacttatagaagagttatagctgcttgcttacggcctctagaacagtttacc
cagaaactagctgaaggtctagagtgctcttcagctgaaaagtcaatgcaactgtctgac
cagttaacttcaccaacggagcggcttgctgttctgaaactctatgagtcattttttgat
gcacagctgtgtgcatggtgtgcacgggttgttgcttcattgacttcaaggtcgcgtaag
gaggacaaatttggtgttgctcaactctcagggagtaatgctgctgtaatctcaacattg
ttatctagtttattagctgtggaaactctcatgggaaagaaaaccaacgtacagtcggca
catttgatgggtcctgctggaatcaaatgggccaccgtcaacactggcagaagggagtca
acagccggtgcgatggggaaaataagagggagccctctgtatgccaaagcttattcaatg
gctgatatcctgaaaacttcaatttactgcattgcatctgcttttcacaatgagatgctg
aacagtgggaaagcaggtctcctcgagaaggattggattattagcagtaaaccactttat
ggaactcacgagctcctcctacacaaattgagacttttcttggactaccaggcgaactag
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