Salvia miltiorrhiza (redroot sage): 131019599
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Entry
131019599 CDS
T09291
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131019599
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131019599
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131019599
NCBI-ProteinID:
XP_057804164
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Position
4:complement(28374365..28376668)
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AA seq
405 aa
AA seq
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MAFSSLPFLFLLFCFLLPSLIASSPPLKDPELVVREVHRQLNASRRKLGFLSCNTGNPID
DCWRCDSNWEKNRQKLADCAIGFGKNAIGGRDGKIYVVTESGGDDPVNPRPGTLRHAVIQ
EEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIANGPCITIQGVTNIIIHGIHIHD
CKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCQDGLIDAIHGSTAIT
ISNNYMTHHDKVMLLGHSDSYTQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSAEPTINSQGNRFLAPNDRFSKEVTKHEDAPESQWKSWNWRSEGDLMLNGA
YFTPSGAGASSSYAKASSLGARPSSLVSSITSGAGSLNCRKGSHC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctttctcctcactaccattcttgttcctcttgttttgcttcttgctcccttctctc
attgcctcctctccgccactaaaagaccctgaattagtggtccgagaagttcataggcag
ttgaatgcctcgaggaggaaattggggttcctctcgtgcaacacagggaaccccatcgat
gattgctggcggtgcgactccaattgggagaagaaccgccagaagttggcggattgtgca
attgggttcggtaaaaatgccattgggggccgagacggcaagatctacgtcgtgacggag
tctggcggggatgacccagtcaaccctaggccggggacgctccgtcacgccgtcatccaa
gaggagccgttatggatcatattcgcacgtgacatggtgatccaattgaaggaggagttg
atcatgaactcattcaagaccatcgatggaaggggtgctagtgtgcacattgctaatggg
ccatgcatcaccattcaaggcgtcaccaacatcattatacatggcatccacattcatgac
tgcaagcaaggtgggaacgctatggtgcgcgactccccacggcactacgggtggaggacc
atatcggacggcgacggcgtgtcgatcttcggcgggagccacgtgtgggtagatcattgc
tctctgtccaactgccaagatggcttgatcgatgccatccatgggtccacagccatcacc
atatcaaataattacatgactcaccatgataaagtcatgcttttagggcatagcgattca
tacacacaagataaaggcatgcaggtcactattgccttcaatcacttcggcgaaggccta
gttcaaagaatgcctcgatgcagacatgggtacttccatgtggtgaacaatgactacacg
cattgggagatgtatgctattggcgggagcgcggagcccacaattaatagccaaggcaat
agatttcttgcaccaaatgataggttcagcaaagaggtgaccaaacatgaggatgctccg
gaaagtcaatggaaaagttggaattggagatcggaaggggacttgatgttgaacggtgct
tattttacaccgtcgggagctggggcgtcgtcgagctacgctaaagcatcgagccttggc
gcccgaccctcgagcctagtcagctccattacatccggagctggtagcctcaattgtcgg
aagggatcacattgttag
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