Salvia miltiorrhiza (redroot sage): 131019623
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Entry
131019623 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC131019623
KO
K26109
nuclear exosome regulator NRDE2
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131019623
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131019623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
Suf
Motif
Other DBs
NCBI-GeneID:
131019623
NCBI-ProteinID:
XP_057804198
LinkDB
All DBs
Position
4:28743777..28751452
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AA seq
1151 aa
AA seq
DB search
MAEEDQTTKTTPLFAAFAGGAATDSGNNATAKWLQNSSFNTDLSVINDAVAKYNLTYDEE
PEEEEDAAEEINARKRPPQYEMVPSDASASSDEDLRRKSKKKKKRRKEESSASRASFSYA
ATLSSTSRKPGVEKWASSPTANEKEYYFDSRGDRDNLAFGSIYRMDVARYKLYNSKKVSG
QNFFQRNKRACRLEGDNDVDALDSKLRSGGRYWSVKYAAIERHKDLKRMRVLAPRNHVKS
SVADYIPLVDEGSDSGRVSSAEVVEESWEDEVSRKTKEFNKMTREHPQDESLWLAFAEFQ
DKVASKQSHKGARLQILEKKISILEKATEINPESEDLLISLMKAYQSRDSTDTLIRRWEK
ILTSNSGSCKLWKEFLRVLRGEFSRFKVSEIRKMYANAIQALAGACIKQHRQAHPSDNAT
SIDPTIVQLELGLVDVFIGLCRFEWQAGYQELATALFQAELEYSLFSPFVLSEQSKQRLF
QHFWSGNGARIGEDGALGWLTWIEKEEEQRQRLISEEASDAVEEGGWTGWFDPSSETKEI
EMPGITNEGQVVEEELNDELDSSDVEQKDDVESLLKALGIDAAAEADIKIKDTETWTKWS
KAEITRDFDHWMPLRANSDQVSHDDATAEAEDDEQILSIILYEDVSDYLFSLKSEEARFS
LVSQFIDFFEGRIAQWTCTNSSSWIAKTLSLESPPCSLLEDLGKVHDVLVRKSTNLRSFS
LELLLKSSDDSNMRTNMMKFLRNAILLCLKVFPKNYILEEAALVAEELSNTRMNSTSYSV
TPCRALAKTLLKNNRQDVLLCGVYAKREAFYGNIDHSRKVFDMALSSVEGLPLDVRSNAS
LLYFWYAEVELANDSSESSDSSCRAIHILSCLGSGTRYTPFKGQLSSVQQLRARQGFKDR
IRMLSSTWAHGVIDDHSAAFISSAALFEELTSGWACALEILEKSFTMVLPERRRNSRQLE
FLFTYYVRMLDRNHMELKLSGVWESIVKGLQLYPFNPHLHYALVEISYLYTSPNKLRWTF
DDHCRKNPSAITWLYALAFEMSTGGSQHRIRGLFERALEDDKLHNSVILWRCFIEYERSV
ACNNSGAKRVFFRATHACPWSKKLWLDGFLKLNSVLSVKELSDLQEVMREKELNLRTDIY
EILLQDDEMDA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggaccaaactaccaaaacgacgccgctcttcgccgctttcgccggcggt
gccgccactgatagtggcaacaacgctacggcgaaatggctgcagaactccagcttcaac
accgacctctccgtcataaacgacgccgttgccaaatacaacctcacctacgatgaggaa
ccggaggaagaagaagacgcagcggaagaaattaatgccaggaaacggccgccgcagtac
gagatggtgccgtcagatgctagcgcttcttcggatgaagaccttaggaggaagagtaaa
aagaagaagaaaaggagaaaggaggagtcgagcgcttcgcgtgcatcgtttagctatgcc
gcaacactatcctctacttcgaggaaaccaggtgttgagaaatgggcgtcttctcctact
gctaatgagaaagagtactactttgattcccgtggagatcgcgataatttagcctttggt
agcatctacagaatggatgttgctcgttataagctttacaattctaagaaagtatctgga
cagaactttttccagcggaataaaagagcttgtcgtttggagggggataatgatgttgat
gcgttagatagcaaactcaggtcaggggggcgctattggtcggtaaaatatgctgctatc
gagcgtcataaggacttgaaacgaatgcgagttcttgctcctagaaaccatgtcaagagc
tcggttgctgattatatccccttagttgatgaaggttctgatagtggacgggtatctagt
gctgaagtagttgaagagtcctgggaagatgaggtctcgcggaaaacaaaggagttcaat
aagatgacaagggaacatcctcaggacgagagtctgtggttggcctttgcggagtttcaa
gacaaggtggcgagtaaacagtctcataaaggtgctcgcctacagatccttgagaagaaa
atcagtattctggagaaagcaactgagattaatccagagagtgaagatttacttatttct
cttatgaaagcttatcagagcagagatagcaccgatacgctgattaggagatgggagaag
atacttacatccaattctggaagttgcaagctgtggaaagaatttttgcgggttctccgg
ggtgaattttccagattcaaggtttctgagataaggaaaatgtatgcaaatgctatccaa
gccttggctggtgcttgcataaagcagcataggcaggctcatccatccgacaatgcaaca
tcaattgatccgactattgttcaactggagcttggtttggtcgatgttttcattggtctt
tgccgcttcgagtggcaggcaggttaccaagaattggcaactgctttatttcaggcagag
cttgagtatagtttgttttctccatttgttctctcggaacaaagtaagcaaagactgttt
cagcacttttggagtggtaatggtgccagaatcggggaagatggagcccttggatggtta
acttggatagagaaggaggaagaacagagacagaggcttatctctgaggaggcctcagat
gcagttgaggaaggtggttggacaggttggtttgacccatcatccgagactaaggaaatt
gaaatgccaggaattactaatgagggacaggtggttgaagaggaattaaatgatgaactg
gactcgagtgatgttgagcagaaggatgatgttgaatctctgcttaaagcacttggcatt
gatgctgctgctgaagctgatataaagatcaaagatacagaaacatggactaagtggtca
aaggcagaaatcacaagagatttcgatcattggatgcctcttcgtgctaattctgatcag
gtttctcatgatgatgccactgctgaagctgaagatgatgaacaaattttgagcataata
ttgtatgaagatgtgagcgattacctgttctcactcaagtctgaggaagcccgattttct
cttgtctcccagtttatagatttcttcgaaggaaggatagctcagtggacttgcacaaac
agttcaagttggattgcaaagacacttagtttagaaagtcctccctgttctcttctagag
gatttgggaaaagtgcacgatgttctggtgaggaagtcaaccaatctaagaagttttagc
ttggagctacttttaaaaagttcagatgactcgaatatgaggactaatatgatgaaattt
ctccgaaatgctatcttactttgtttgaaagtgtttccaaaaaactacatcttggaggaa
gctgctcttgttgctgaggagttatcaaacacaaggatgaattcaacaagttattctgtg
acaccatgtcgagctctggccaagactttactgaaaaataataggcaggatgttttgcta
tgtggagtttatgctaaaagagaagcgttctatgggaatattgatcattccaggaaggtt
tttgacatggctctatcatctgttgaggggcttccactggatgttcggtcaaatgcatct
ctgttgtacttctggtatgcagaagttgagcttgcaaatgattcttcagaaagttctgac
tcctcatgccgtgcaatacatatcttatcttgcttaggcagtggaacaagatatactcca
tttaaaggacaattgtcaagtgtccaacaacttagagcccgccaggggttcaaagatcgt
ataagaatgttgagttcaacatgggcacatggtgtcatagatgatcattctgctgctttt
atcagttcagcagctttatttgaagagctgacgtctggatgggcctgtgctttagaaatt
ctggaaaagtcttttacaatggtgcttccagagaggaggagaaatagccgacagcttgaa
ttcttgtttacctattacgtgaggatgcttgacagaaatcacatggaacttaagctttca
ggagtttgggaatctattgtgaaagggttgcagttatatccatttaacccgcatcttcac
tatgctttagttgaaatcagctatctctacacttcacccaataaattgcggtggactttt
gatgatcattgccgaaaaaacccatctgccattacatggctttacgcgttggcatttgag
atgagtactggaggctcccagcacagaatacgcggactttttgaaagggcgttggaggat
gacaaattgcacaattcagtgattctctggcgctgtttcattgaatacgagaggagtgta
gcatgcaataattctggagctaaaagagtgttctttcgtgcaacacatgcatgcccctgg
tcgaaaaagctgtggcttgatggttttctcaaactgaattcagtattgtctgtgaaagag
ctgtcggacctccaagaagtcatgcgagaaaaggaactcaatctcaggactgatatatat
gagattttattgcaagatgatgagatggatgcttag
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