Salvia miltiorrhiza (redroot sage): 131020045
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Entry
131020045 CDS
T09291
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131020045
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
131020045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
Cast
Tropomyosin
SbcC_Walker_B
Laminin_II
AAA_21
Sipho_Gp157
DUF1664
Feld-I_B
CC_CDK5RAP2
Tsp36_N
ABC_tran
pAdhesive_17
Motif
Other DBs
NCBI-GeneID:
131020045
NCBI-ProteinID:
XP_057804659
LinkDB
All DBs
Position
4:complement(26862887..26886900)
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AA seq
1059 aa
AA seq
DB search
MQPSSLFPDDPTRRPKRLQAGIISRISLLNFMCHSNLEIEFGDLVNFITGQNGSGKSAIL
TALCVAFGCRARGTQRANTLKDFIKSGCSYALVQVEIKNQGEDAFKHELYGDIIIVERRI
TESAGGNIALKNSQGRKIGSKREDLREIVEYFNIDVENPCTIMSQDKSREFLHSGNGKDK
FKFFFKATLLQQVDDLLQGISKQLHDANGLVSHLEDSLRPAKKELDELQDKIKNMEAMEK
ISQQVQSLREKLAWSWVYDADRKLDAQHKLIEKLKGRIPSCQAKIDQKHHMMEELNDRLA
TKKNEISSMMERTSEVRRMKEDLQESLSMAAKEQFELTGERDRINRQIAKMSQQVRSLER
QIQESHEQYVKNTQAEENEMEERVRELQNEADEANANILRLKEEEDNMMQRITTVENEIQ
QISHQIEDVEQSNREFSSRIREIQMHQRNKVTAFGGGRVTHLLQVIERNQHKFSMPPIGP
IGAHVQLEHGDMWAIAIENAVGRLLNTFIVTNHNDSRILRACAREANYNHLPIIVHDFRR
PRINIPRLMLPQTNHPTALSVLHTDNSTVLNVLIDSGNAERQVLVKDYEVGKAVTFDQRI
PNLKEVYTSDGYKMFYRSSAQTILPPNKNIRAGRLSGSFDDQIKYLEREASESNLKAQQG
RGQKRAKEEELMDLRNILNNVKRRRITLDRQFMSKKFELNDAKNLLSSEANAAHDSNLDE
LHQDISKLQDEIREKEALLAKIQDRVNEAGTKAKNLKMSLENLCDSAKSEMDALEKAENE
LMTIEGDLKEAERERKHYEGIMHTKVLADLKNAEAEYRELEHSCQESRRKASIIIPESEI
DVGFVKESNPEKLSAELTRSTEKLKREGQRYPESIDDLRMLHEKKKRKISRKLDTYKAFQ
EKLEACEKALNLRRSKFQRNATLLKRQLTWQFNGHLKKKGISGQIKVSYEEQTLSVEVKM
PQDASSSSVRDTSGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDA
LVDFALAQGSQWIFITPHDISMVKNDERIKKQQMAAPRG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcagccctcttctctcttccccgacgaccccactcgccgccccaaacgcctacaagcc
ggtataatctccagaatcagtctcctgaacttcatgtgccacagcaatctcgaaatcgag
ttcggagacttggttaacttcatcaccggtcaaaatgggagtggaaagagcgcaatatta
acggcactttgtgtagcatttgggtgccgagctcgtggtacgcagagagcgaatactctg
aaggattttataaagtctggctgcagctatgcacttgttcaagttgagataaaaaatcaa
ggtgaagatgcttttaagcatgaactgtatggagacatcatcattgtggagcgtagaatt
acagaatctgctggtggcaacatcgcattaaaaaacagtcaaggtaggaaaattggctcc
aagagagaggatcttcgtgagattgtagaatactttaatattgatgtagagaatccatgc
acgatcatgagccaagacaagagcagagaatttctacattcggggaatggaaaagacaag
ttcaagttctttttcaaggcaacacttcttcaacaagtggatgacctactacaaggtatt
tcaaagcaactgcatgatgcaaatggcctggttagtcatttggaagattcgttgaggccg
gcgaagaaggaacttgatgagttacaagataagattaaaaacatggaagctatggagaag
atatcacaacaggtgcagtcattaagggagaaactagcttggtcgtgggtatatgatgct
gatagaaagcttgatgcgcagcataagttgattgaaaagctaaaaggaaggatacctagc
tgtcaagcgaagattgaccagaagcatcacatgatggaagaattgaatgatcgattggca
acaaagaaaaatgaaatatcaagtatgatggaaagaacatctgaagttagaagaatgaag
gaggatctgcaggaaagtctttctatggctgcgaaggagcagtttgagctaacaggggaa
cgagatcgcataaataggcaaattgcaaagatgagtcaacaggtcaggtcacttgagagg
cagattcaggaatcccatgagcagtatgtgaaaaatacacaggctgaagaaaatgagatg
gaggaaagggttagagaacttcaaaatgaagctgatgaagctaatgccaacattctgaga
ttgaaggaagaggaggataacatgatgcaaaggataactacggtagaaaatgaaatacaa
caaatttctcatcagattgaagatgtcgagcaaagcaatcgtgagttttcttcacggatc
cgtgaaatccaaatgcatcaaagaaacaaggttactgcatttggaggaggtcgggtaacc
catctcttgcaggtgatcgagcggaatcaacataaatttagtatgccacccattggtccc
ataggcgcccatgtgcaactggaacatggagacatgtgggctatagctattgaaaatgca
gttggcaggttgctcaacactttcattgtcacaaatcataatgattctcgtatcttaaga
gcatgtgcaagagaagcaaactataaccacttaccgattattgtacatgatttcagaaga
ccaaggatcaacattccgaggctcatgcttcctcagactaatcatcccactgcattgtct
gttctgcatacagacaattctacagtactcaatgttttgattgatagtggtaatgctgag
aggcaagtccttgttaaagattatgaagttggtaaagcagtcacctttgatcaaaggata
ccaaaccttaaggaggtttacacatcggatgggtacaaaatgttttaccgcagttcagcc
caaactattcttccaccaaacaaaaacataagggctggtcgtctttctggttcatttgat
gatcaaattaaatatctggagagagaagcatcagaatcgaatttgaaagctcaacaaggc
cgaggacagaaacgggcgaaggaggaagagttgatggatcttcgaaacattttaaacaat
gtaaagagaaggcgcatcactctggatcggcaatttatgtcaaaaaaatttgagctgaac
gatgcgaagaatttactttcctcagaagctaatgcagcacatgattctaatctggatgag
ctccatcaagatatatccaaactgcaagatgagatacgagaaaaagaagctttgctagca
aagattcaggatagagtgaatgaagcaggaactaaagctaaaaatcttaaaatgtcattg
gagaatctgtgtgattcggcaaagtcagaaatggatgcattagaaaaagcagagaatgaa
ctgatgacgattgagggagatctaaaagaagcagaaagggaaagaaagcattatgaagga
attatgcacactaaagtccttgctgacctaaaaaatgctgaggccgagtatcgggagctt
gagcacagctgtcaggagagtcgtcgcaaagcgtcaattataattcctgagagtgagatt
gatgtaggattcgttaaggaaagcaatcctgagaaactcagtgccgaactcactaggtct
actgaaaaacttaagcgtgagggccaaagatatccagaatctattgatgatctcagaatg
ttacatgagaaaaaaaagcgtaaaatatcaagaaaactggatacttacaaagccttccag
gaaaaattggaagcatgtgaaaaggcactaaacttgagacggagcaaattccagaggaac
gcaacacttctgaagcgccagctgacatggcaatttaacggccatttgaaaaagaaaggg
atcagtggtcagatcaaagttagttatgaggagcagactctctcagttgaggttaagatg
ccgcaagatgcatcaagcagctccgttcgtgacactagtggactttcaggtggtgagcga
tccttttcaacattgtgttttgcccttgcacttcatgagatgacagaagcaccctttcgt
gcaatggatgaatttgatgtatttatggacgctgttagcagaaaaatcagcctggacgcc
ttagtggatttcgctttggcccaaggttcccaatggatatttataaccccacatgacatc
agtatggttaagaatgatgaaaggatcaagaagcaacaaatggctgctcctcgcgggtga
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