Salvia miltiorrhiza (redroot sage): 131020112
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Entry
131020112 CDS
T09291
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131020112
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smil01009
]
131020112
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
131020112
Protein phosphatases and associated proteins [BR:
smil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131020112
Spliceosome [BR:
smil03041
]
Common components
Common spliceosomal components
SR proteins
131020112
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
CoV_nucleocap
RRM_DEAH11
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131020112
NCBI-ProteinID:
XP_057804769
LinkDB
All DBs
Position
4:48967061..48969967
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AA seq
234 aa
AA seq
DB search
MADSPRKRYARSPSPWEENSRSRSRSRSKSRSRSRSWSRPRARSRSRSRSRGRGTGREEV
VNDGTTLYVTGLSTRVTERELEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVNMDSSDDAN
RCIKHLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSSRGDGYGDRGRYRGGSSREDY
GYRRSPRRSPYRGGRDYSPRHSPYGGSGRSRRERSRSYSPPRHSLERNYARGSR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctccaagaaaacggtatgcacgctctccctctccatgggaagaaaattcg
agatccaggtcaagatctaggtccaaatctagatctcgttctagatcatggtcaagacca
agggcgagatctagatcaagatctaggtcaagaggtcgtggcactggcagggaagaagtt
gttaatgatggaactacactttatgttactggcctatctacaagggtcactgagagagag
cttgaagatcatttctcaaaggaaggaaaggtcaagtctgtctttttggttgtggaaccg
cgatctcgtgtatctcgtggatttgcttttgttaatatggactcttcagatgatgctaat
cgctgtatcaaacacctcaatcagtcagtgcttgaaggccggtacataactgtagagagg
tcacggaggaaacgcgcaaggactcccactcctggtcattatcttggtctgaaaagctct
cggggtgatggttatggggatcgtggaagatatcgtggaggatccagccgtgaagattat
ggctacaggaggtctcctagacgctcgccttatagaggtgggcgtgattactcgcccaga
cattcgccttatggtggaagtggaagatcaagaagggaaaggtccaggtcatactctccc
cctcgacacagtcttgaaaggaactatgcacgtggttctaggtga
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